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NECEvent2014_6_4_scaffold_5

Alias: 176_004_scaffold_5

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Displaying items 1-30 of 183 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_5_1
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(134..343)
DNA (210bp) protein (70aa)
Putative molybdenum-pterin-binding protein 2 {ECO:0000313|EMBL:EJO50376.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillone
Putative molybdenum-pterin-binding protein 2 {ECO:0000313|EMBL:EJO50376.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillone
TOBE domain-containing protein
NECEvent2014_6_4_scaffold_5_trna_1
unknown

Not on your lists

comp(447..517)
DNA (71bp)
transferRNA
NECEvent2014_6_4_scaffold_5_2
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

654..1979
DNA (1326bp) protein (442aa)
PepSY domain protein {ECO:0000313|EMBL:EFL57668.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Co
PepSY domain protein {ECO:0000313|EMBL:EFL57668.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-134-V-Co
PepSY-associated TM helix domain-containing protein
NECEvent2014_6_4_scaffold_5_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

2107..3285
DNA (1179bp) protein (393aa)
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadal
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadal
Na+/H+ antiporter NhaA
NECEvent2014_6_4_scaffold_5_4
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3314..4486
DNA (1173bp) protein (391aa)
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadale
Na(+)/H(+) antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; Sodium/proton antiporter NhaA {ECO:0000256|HAMAP-Rule:MF_01844}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadale
Na+/H+ antiporter NhaA
NECEvent2014_6_4_scaffold_5_5
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

4505..5116
DNA (612bp) protein (204aa)
Uncharacterized protein {ECO:0000313|EMBL:EPD79871.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Uncharacterized protein {ECO:0000313|EMBL:EPD79871.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
hypothetical protein
NECEvent2014_6_4_scaffold_5_6
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

5257..6081
DNA (825bp) protein (275aa)
Pur operon repressor PurR {ECO:0000313|EMBL:EPD79872.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Pur operon repressor PurR {ECO:0000313|EMBL:EPD79872.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
purine operon repressor, PurR
NECEvent2014_6_4_scaffold_5_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6091..7464
DNA (1374bp) protein (458aa)
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;"
UDP-N-acetylglucosamine pyrophosphorylase
NECEvent2014_6_4_scaffold_5_8
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

7604..8557
DNA (954bp) protein (318aa)
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
Ribose-phosphate pyrophosphokinase {ECO:0000256|HAMAP-Rule:MF_00583}; Short=RPPK {ECO:0000256|HAMAP-Rule:MF_00583};; EC=2.7.6.1 {ECO:0000256|HAMAP-Rule:MF_00583};; 5-phospho-D-ribosyl alpha-1-diphosph
ribose-phosphate pyrophosphokinase
NECEvent2014_6_4_scaffold_5_9
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8568..9146
DNA (579bp) protein (193aa)
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
Peptidyl-tRNA hydrolase {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBase:RU000673}; Short=PTH {ECO:0000256|HAMAP-Rule:MF_00083};; EC=3.1.1.29 {ECO:0000256|HAMAP-Rule:MF_00083, ECO:0000256|RuleBa
peptidyl-tRNA hydrolase
NECEvent2014_6_4_scaffold_5_10
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9205..10686
DNA (1482bp) protein (494aa)
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFL57728.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veill
Orn/Lys/Arg decarboxylase, major domain protein {ECO:0000313|EMBL:EFL57728.1}; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veill
Orn/Lys/Arg decarboxylase major region
NECEvent2014_6_4_scaffold_5_11
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

10689..11375
DNA (687bp) protein (229aa)
dTMP kinase {ECO:0000313|EMBL:EUB20755.1}; EC=2.7.4.9 {ECO:0000313|EMBL:EUB20755.1};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source
dTMP kinase {ECO:0000313|EMBL:EUB20755.1}; EC=2.7.4.9 {ECO:0000313|EMBL:EUB20755.1};; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source
thymidylate kinase
NECEvent2014_6_4_scaffold_5_12
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11465..12505
DNA (1041bp) protein (347aa)
Uncharacterized protein {ECO:0000313|EMBL:EPD79878.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Uncharacterized protein {ECO:0000313|EMBL:EPD79878.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
DNA polymerase III subunits gamma/tau
NECEvent2014_6_4_scaffold_5_13
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

12506..13351
DNA (846bp) protein (282aa)
Uncharacterized protein {ECO:0000313|EMBL:EPD79879.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Uncharacterized protein {ECO:0000313|EMBL:EPD79879.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
PSP1 domain-containing protein
NECEvent2014_6_4_scaffold_5_14
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13344..14072
DNA (729bp) protein (243aa)
Ribosomal protein L11 methyltransferase-like protein {ECO:0000313|EMBL:EUB20746.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="
Ribosomal protein L11 methyltransferase-like protein {ECO:0000313|EMBL:EUB20746.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="
methyltransferase small
NECEvent2014_6_4_scaffold_5_15
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14059..14904
DNA (846bp) protein (282aa)
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
Ribosomal RNA small subunit methyltransferase I {ECO:0000256|HAMAP-Rule:MF_01877}; EC=2.1.1.198 {ECO:0000256|HAMAP-Rule:MF_01877};; 16S rRNA 2'-O-ribose C1402 methyltransferase {ECO:0000256|HAMAP-Rule
uroporphyrin-III C/tetrapyrrole methyltransferase
NECEvent2014_6_4_scaffold_5_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


14939..16888
DNA (1950bp) protein (650aa)
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
Methionine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424}; EC=6.1.1.10 {ECO:0000256|HAMAP-Rule:MF_01228, ECO:0000256|SAAS:SAAS00252424};; Methionyl-tRNA synthetase {ECO:
methionyl-tRNA synthetase
NECEvent2014_6_4_scaffold_5_17
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

16888..17658
DNA (771bp) protein (257aa)
Hydrolase, TatD family {ECO:0000313|EMBL:EJO50336.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Hydrolase, TatD family {ECO:0000313|EMBL:EJO50336.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
TatD family hydrolase
NECEvent2014_6_4_scaffold_5_18
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17693..19345
DNA (1653bp) protein (551aa)
Putative exopolyphosphatase {ECO:0000313|EMBL:EKY20008.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.
Putative exopolyphosphatase {ECO:0000313|EMBL:EKY20008.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.
Ppx/GppA phosphatase
NECEvent2014_6_4_scaffold_5_19
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

19355..20905
DNA (1551bp) protein (517aa)
Uncharacterized protein {ECO:0000313|EMBL:EPD79885.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Uncharacterized protein {ECO:0000313|EMBL:EPD79885.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Exopolyphosphatase-like protein
NECEvent2014_6_4_scaffold_5_20
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

21006..23024
DNA (2019bp) protein (673aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferas
polyphosphate kinase
NECEvent2014_6_4_scaffold_5_21
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

23441..24412
DNA (972bp) protein (324aa)
3D domain protein {ECO:0000313|EMBL:EJO50381.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
3D domain protein {ECO:0000313|EMBL:EJO50381.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
hypothetical protein
NECEvent2014_6_4_scaffold_5_22
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(24532..25467)
DNA (936bp) protein (312aa)
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
Peptide methionine sulfoxide reductase MsrA {ECO:0000256|HAMAP-Rule:MF_01401}; Short=Protein-methionine-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01401};; EC=1.8.4.11 {ECO:0000256|HAMAP-Rule:MF_014
methionine-R-sulfoxide reductase
NECEvent2014_6_4_scaffold_5_23
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(25468..26589)
DNA (1122bp) protein (374aa)
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EJO50402.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EJO50402.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
Methionine synthase, vitamin-B12 independent {ECO:0000313|EMBL:EJO50402.1}; EC=2.1.1.14 {ECO:0000313|EMBL:EJO50402.1};; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veil
vitamin-B12 independent methionine synthase
NECEvent2014_6_4_scaffold_5_24
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(26812..27747)
DNA (936bp) protein (312aa)
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EJO50302.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp
Transcriptional regulator, LysR family {ECO:0000313|EMBL:EJO50302.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp
MarR family transcriptional regulator
NECEvent2014_6_4_scaffold_5_25
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

27856..28386
DNA (531bp) protein (177aa)
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
Ribonuclease M5 {ECO:0000256|HAMAP-Rule:MF_01469}; EC=3.1.26.8 {ECO:0000256|HAMAP-Rule:MF_01469};; RNase M5 {ECO:0000256|HAMAP-Rule:MF_01469}; Ribosomal RNA terminal maturase M5 {ECO:0000256|HAMAP-Rul
primase/topoisomerase-like protein
NECEvent2014_6_4_scaffold_5_26
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists


28444..29298
DNA (855bp) protein (285aa)
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
Ribosomal RNA small subunit methyltransferase A {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015019}; EC=2.1.1.182 {ECO:0000256|HAMAP-Rule:MF_00607, ECO:0000256|SAAS:SAAS00015085};; 16S rR
dimethyladenosine transferase
NECEvent2014_6_4_scaffold_5_27
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(29373..30833)
DNA (1461bp) protein (487aa)
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EKY19999.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atyp
Putative sodium/glutamate symporter {ECO:0000313|EMBL:EKY19999.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atyp
sodium/glutamate symporter
NECEvent2014_6_4_scaffold_5_28
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(30857..32452)
DNA (1596bp) protein (532aa)
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=936591 species="Bacteria; Firmicutes; Negativicute
Peptide chain release factor 3 {ECO:0000256|HAMAP-Rule:MF_00072, ECO:0000256|SAAS:SAAS00089051}; Short=RF-3 {ECO:0000256|HAMAP-Rule:MF_00072};; TaxID=936591 species="Bacteria; Firmicutes; Negativicute
peptide chain release factor 3
NECEvent2014_6_4_scaffold_5_29
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

32629..34941
DNA (2313bp) protein (771aa)
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=936591 species="Bacteria; Firmicute
DNA topoisomerase {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608}; EC=5.99.1.2 {ECO:0000256|RuleBase:RU000518, ECO:0000256|SAAS:SAAS00046608};; TaxID=936591 species="Bacteria; Firmicute
DNA topoisomerase III
Displaying items 1-30 of 183 in total

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