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NECEvent2014_6_4_scaffold_375_2

Organism: NECEvent2014_6_4_Veillonella_atypica-rel_39_503

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: comp(1992..2270)

Top 3 Functional Annotations

Value Algorithm Source
DNA-binding helix-turn-helix domain protein {ECO:0000313|EMBL:EJO49621.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 92.0
  • Bit_score: 179
  • Evalue 2.00e-42
DNA-binding helix-turn-helix domain protein {ECO:0000313|EMBL:EJO49621.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel similarity UNIPROT
DB: UniProtKB
  • Identity: 98.9
  • Coverage: 92.0
  • Bit_score: 179
  • Evalue 2.00e-42
helix-turn-helix domain-containing protein similarity KEGG
DB: KEGG
  • Identity: 60.9
  • Coverage: 92.0
  • Bit_score: 120
  • Evalue 2.90e-25

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Taxonomy

Veillonella sp. ACP1 → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 279
ATGTATATCGGAGACATTATAAAAGCATTTCGCGAGGAACATCAACTTTCACAAGAAACATTTGCAGCAAAAGCTGGTTTAACAGTTAGCGAAATCAATACACTAGAACAAAACTTTCAAGACGGGTCTTCTACACCCGTACCAGTTGCGATTCGACAAATAAAAGGCATTGCTCAAGGCATGGAACAACCAATGCCGGTTATCATGAGTCAAATACCATCCGACCAACAAGTTGTGGTCAACGTCGTCGCTGAATCAGATCAGCCTCATGCCAAATAA
PROTEIN sequence
Length: 93
MYIGDIIKAFREEHQLSQETFAAKAGLTVSEINTLEQNFQDGSSTPVPVAIRQIKGIAQGMEQPMPVIMSQIPSDQQVVVNVVAESDQPHAK*