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NECEvent2014_6_4_scaffold_375

Alias: 176_004_scaffold_375

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_375_trna_1
unknown

Not on your lists

736..808
DNA (73bp)
transferRNA
NECEvent2014_6_4_scaffold_375_trna_2
unknown

Not on your lists

928..1001
DNA (74bp)
transferRNA
NECEvent2014_6_4_scaffold_375_1
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1522..1974)
DNA (453bp) protein (151aa)
Uncharacterized protein {ECO:0000313|EMBL:EJO49596.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
Uncharacterized protein {ECO:0000313|EMBL:EJO49596.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ACP1.;"
NECEvent2014_6_4_scaffold_375_2
Veillonella sp. ACP1, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(1992..2270)
DNA (279bp) protein (93aa)
DNA-binding helix-turn-helix domain protein {ECO:0000313|EMBL:EJO49621.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
DNA-binding helix-turn-helix domain protein {ECO:0000313|EMBL:EJO49621.1}; TaxID=936588 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
helix-turn-helix domain-containing protein
NECEvent2014_6_4_scaffold_375_trna_3
unknown

Not on your lists

3033..3114
DNA (82bp)
transferRNA
NECEvent2014_6_4_scaffold_375_3
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

3287..6577
DNA (3291bp) protein (1097aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1128111 species="Bacteria; F
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1128111 species="Bacteria; F
transcription-repair coupling factor
NECEvent2014_6_4_scaffold_375_4
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6574..8178
DNA (1605bp) protein (535aa)
Putative stage V sporulation protein B {ECO:0000313|EMBL:EKY17297.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella a
Putative stage V sporulation protein B {ECO:0000313|EMBL:EKY17297.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella a
polysaccharide biosynthesis protein
NECEvent2014_6_4_scaffold_375_5
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8162..8941
DNA (780bp) protein (260aa)
MazG family protein {ECO:0000313|EMBL:EKY17298.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
MazG family protein {ECO:0000313|EMBL:EKY17298.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
MazG family protein
NECEvent2014_6_4_scaffold_375_6
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

8994..9293
DNA (300bp) protein (100aa)
DNA-binding protein HU {ECO:0000313|EMBL:EPD79663.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
DNA-binding protein HU {ECO:0000313|EMBL:EPD79663.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
histone family protein DNA-binding protein
NECEvent2014_6_4_scaffold_375_7
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

9391..10545
DNA (1155bp) protein (385aa)
Monogalactosyldiacylglycerol synthase, C-terminal domain protein {ECO:0000313|EMBL:EFL55399.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella
Monogalactosyldiacylglycerol synthase, C-terminal domain protein {ECO:0000313|EMBL:EFL55399.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella
monogalactosyldiacylglycerol synthase
NECEvent2014_6_4_scaffold_375_8
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(10642..10962)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:EFL55397.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V
Uncharacterized protein {ECO:0000313|EMBL:EFL55397.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica ACS-049-V
hypothetical protein
NECEvent2014_6_4_scaffold_375_9
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

11102..13057
DNA (1956bp) protein (652aa)
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EUB26058.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EUB26058.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp.
ABC transporter
NECEvent2014_6_4_scaffold_375_10
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

13189..14658
DNA (1470bp) protein (490aa)
Hydrogenase, Fe-only {ECO:0000313|EMBL:EFL57012.1}; EC=1.12.-.- {ECO:0000313|EMBL:EFL57012.1};; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella
Hydrogenase, Fe-only {ECO:0000313|EMBL:EFL57012.1}; EC=1.12.-.- {ECO:0000313|EMBL:EFL57012.1};; TaxID=866778 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella
hydrogenase, Fe-only
NECEvent2014_6_4_scaffold_375_11
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

14765..14941
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY17304.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
Uncharacterized protein {ECO:0000313|EMBL:EKY17304.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella atypica KON.;"
hypothetical protein
NECEvent2014_6_4_scaffold_375_12
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15109..15600
DNA (492bp) protein (164aa)
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EKY17305.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veill
Phosphoenolpyruvate-dependent sugar phosphotransferase system, EIIA 2 {ECO:0000313|EMBL:EKY17305.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veill
PTS transporter subunit IIA-like nitrogen-regulatory protein PtsN
NECEvent2014_6_4_scaffold_375_13
Veillonella sp. HPA0037, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15616..15891
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:EPD79656.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
Uncharacterized protein {ECO:0000313|EMBL:EPD79656.1}; TaxID=1203593 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. HPA0037.;"
PTS system lactose/cellobiose-specific transporter subunit IIB
NECEvent2014_6_4_scaffold_375_14
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

15913..17280
DNA (1368bp) protein (456aa)
Putative sugar-specific permease, SgaT/UlaA {ECO:0000313|EMBL:EFL55436.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
Putative sugar-specific permease, SgaT/UlaA {ECO:0000313|EMBL:EFL55436.1}; TaxID=866776 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonel
sugar-specific permease SgaT/UlaA
NECEvent2014_6_4_scaffold_375_15
Veillonella sp. ICM51a, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17280..17678
DNA (399bp) protein (133aa)
PF04304 family protein {ECO:0000313|EMBL:EUB26066.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
PF04304 family protein {ECO:0000313|EMBL:EUB26066.1}; TaxID=936591 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella sp. ICM51a.;"
hypothetical protein
NECEvent2014_6_4_scaffold_375_16
Veillonella atypica, Veillonella, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17885..18775
DNA (891bp) protein (297aa)
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY17309.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella a
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EKY17309.1}; TaxID=1128111 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Veillonella.;" source="Veillonella a
AraC family transcriptional regulator
Displaying 19 items

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