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NECEvent2014_6_4_scaffold_375_3

Organism: NECEvent2014_6_4_Veillonella_atypica-rel_39_503

near complete RP 52 / 55 MC: 1 BSCG 51 / 51 ASCG 15 / 38 MC: 2
Location: 3287..6577

Top 3 Functional Annotations

Value Algorithm Source
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1128111 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 999.99
  • Bit_score: 2157
  • Evalue 0.0
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=1128111 species="Bacteria; F similarity UNIPROT
DB: UniProtKB
  • Identity: 99.4
  • Coverage: 999.99
  • Bit_score: 2157
  • Evalue 0.0
transcription-repair coupling factor similarity KEGG
DB: KEGG
  • Identity: 84.5
  • Coverage: 999.99
  • Bit_score: 1859
  • Evalue 0.0

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Taxonomy

Veillonella atypica → Veillonella → Selenomonadales → Negativicutes → Firmicutes → Bacteria

Sequences

DNA sequence
Length: 3291
ATGGATACTTCAATTGACACACTGCTTTCACAAAACCCATCTATGACAGATGGGCTAAAGGCGTTTCGCCAAAAGGGAAAGTCAGTTATATATGGTTTAAGTGGATCACAAAAGTCATTCCTCTTAAGCCGTGCTATTCCAGAGGAACAAGTACAATCTATTATTATCGTGGTGCACGATAAAGAACATAAAGAATTGTGGGAACGGGATTTGGCATTTTTCTGGCCTAATGTGCAGGTATTGCCATTTCCCATTACAGAACGTGTAGAATTTACTACCGTAGCTCGTAGCCTTGAAGGACAAGGGGCTCAAATGCGAGCGCTCAGTATGTTGGCCTGGAATCGTCCTGTTGTAGTCCTCGCTACAATAGAAGAGGCCACGCAATATGTAGTGAGTCCTCAATATGTTATATCTCAAAGTGTGCATCTTGAGGTTTCTCAATCTATAGAGCGAGATGAGCTGTTAGAAAAATTAGTTAAAATTGGATATGAACGCGTAGACCAGGTAGAACAACGTGGTCATTTTTCTGTGCGCGGAGATATTTTTGATATCTTCCCTGTGAATAGTGATGATCCAATACGTATGGAATTCTTTGGCGATGAAATCGACACGATGCGCCATTTCTCCGTAGATACACAACGGTCTATCGAAACGGTAGATTCTTATACGGTGACGCCATTCTTTTTAACCAGCGATGATGCAGATAGTACATTGCTATCTTATGCAAAGGATGGACTTATCATTTATGATGAACCAGTGCGTATTCAAGAAGCGTTGAAGAAATTCTTAAAAGAAGATGCAACACATCGCAAGCAACATTGTGAATGGTCTGAATTGCAACGCTCTGTAGATGCTAAGATTGAGGTGGCTTTCACATTCATGCAACAGCGTTCTATAGGGCTAGCTGGATTTTATCCGATTGGCATTCAAGGCAAAACGATGACGAGCTTTGAGCGTCAAATTCCGTTGTTGATGGATGAAATCAAGCAGTGGCAAAAGCTGGGCAATCAAGTTGTGCTTGTGATTAATAATTTGCAGCGCCGTGAAGGCATAGAAAAGGCTTTGCATGGTGATGCTATTCCGTATAAGCTTTGTGAAAGATGGGATTTTGAGCCTAATACGGTTCACGTTATGCAAGGCTTATTAACTGATGGCTTTGAATTACCGCATAGCCATTTAGTCGTCGTTGTAGAAGGCAATATTTACGGGCAGCAAAAACGCAAACTTCGCAATAAGCCTAAAAAAGGCCAAGAAATTAATTATTTCACGGATTTATCGGTCGGCGATTACGTTGTTCACAGCATGCATGGTATCGGTAAATATGTGGGCTTAAAAACGATTGAAACAGAAGGTATCCATCGAGACTACATTGAAATTGCTTATGCCGGAACAGATAGACTGTATTTGCCTGCTAGTAATTTAGATCAATTGCAAAAGTATATCGGCAATGAAGGCGATGTACCTCGCATTCATAAGATGGGTGGTAGCGATTGGCGTAAAGCGGTTACAAAGGCACAGAAATCCATTGATGATTTGGCGGATAAGCTAGTTGAACTGTATGCGAAACGGGAAATTACAGAAGGATTTGCGTTCTTGCCAGATCAACCGTGGCAACAAGAATTTGAAGATGCCTTTCCTTATGAGGAAACAGAGGACCAATTACAAGCTACGCGAGAAATTAAAGAATCCATGGAACGACCAACACCGATGGATCGCTTGTTAGCGGGGGATGTGGGCTTTGGTAAAACAGAGGTCGCTATGCGTGCCATCTTTAAGGCCGTTGTGAGCGGTAAGCAAGTGGCCGTATTGGTACCAACTACTGTATTAGCTCAGCAACATTACCAAACGTTTTTAAATCGATTTAATCCATTTGGTGTAAAGGTAGATGTACTCAATCGATTCCGTTCTACAGCGGAGAAGAAAGAGGTGCTAAAGGGCGTCGAAAATGGTTCTATCGATATCTTAATCGGCACGCATTCCTTGTTAAATAAAAAGGTAAAATTCAAAGATTTAGGGTTCCTCGTCGTCGATGAAGAGCAACGCTTTGGCGTAGCACAAAAGGAAAAATGGAAGGAATGGGCTAGTAATATTGACGTCCTTACCTTAAGTGCGACACCTATTCCACGGACACTTCATATGTCTCTTGTAGGTGTTCGTGAAATGTCGGTCATTAGTACACCTCCAGAGGATCGACTACCAGTACAGACCTATGTAGTAGAATACGATATGAATCTCATAGCTGATGCAATTAAACGAGAACTTGCTCGAGGGGGACAGGTTTACTTCGTGTATAATCGGGTAGCATCGATTAATCATATGGGTGAACTATTAGAACAGGCGTTGCCAGATTTGCGTTATGCTGTTGCACATGGACAGATGACAGGCCGTCAAATCGAAGAAATTATGACCGATTTCTATGAAGGTCATTATGATGTATTGCTCAGTACAAGCATCATTGAAACAGGCCTTGATATACCAAATGCTAATACGATTATCATATACGATGCGGATCGTTTAGGCTTATCTCAACTCTATCAAATGCGTGGCCGTGTAGGTCGGTCTAGACGACGCGCCTATGCATATTTCATGTATCGACCTGATAAGATGCTTTCAGAAGCGGCAGAAAAACGTTTGAAAGCCATCGAAGAGTTCACTGAATTAGGGGCGGGATTTAAACTGGCTATGCGCGATTTGGAAATTCGTGGGGCCGGTAATCTATTAGGTTCACAACAACATGGTAATATCGCATCGGTCGGCTTTGGCATGTATGTATCTATGTTAGAGGAAGCCATTGCGAAAGCACAAAATAAAGAGGTCGTTAAAGAGGTAGTACCAGATCCTGCTATTGACCTTGAAATCGATGCTTTCATAGATGATGCCTATATCAAGGATAGTGCGCGCAAGATTTCCGTATATCAACGGATGTTACAAATCAAGAATAAAGCGCAGCTTGATGATTTGACGGATGAACTTATCGACCGTTTTGGTACACCAACGGATCCGGTAGATCGTTTACTACGAGTCGCTCAAATTAAGGAACAGGCTCGTTTGTTGGGGGTTAAGAGCATCGTTCGTCGCGATGGTCAGCTCATCATCCATTGGCAAGATGATTCAAAAATGGCCGATTGGGATATGGGTGCTGTTCGCGAGGATTTATGGAAGAAAATGAAGTTCATGGATACAAAACCGGCGTCATTATATATTAGTTTGAATGGATTAAAGGGATCTATTTTAACGATTACAGAAGCGGTGATGAAGGAGTTGTCAAAGAAATCTAAGGGGGGCCTATGA
PROTEIN sequence
Length: 1097
MDTSIDTLLSQNPSMTDGLKAFRQKGKSVIYGLSGSQKSFLLSRAIPEEQVQSIIIVVHDKEHKELWERDLAFFWPNVQVLPFPITERVEFTTVARSLEGQGAQMRALSMLAWNRPVVVLATIEEATQYVVSPQYVISQSVHLEVSQSIERDELLEKLVKIGYERVDQVEQRGHFSVRGDIFDIFPVNSDDPIRMEFFGDEIDTMRHFSVDTQRSIETVDSYTVTPFFLTSDDADSTLLSYAKDGLIIYDEPVRIQEALKKFLKEDATHRKQHCEWSELQRSVDAKIEVAFTFMQQRSIGLAGFYPIGIQGKTMTSFERQIPLLMDEIKQWQKLGNQVVLVINNLQRREGIEKALHGDAIPYKLCERWDFEPNTVHVMQGLLTDGFELPHSHLVVVVEGNIYGQQKRKLRNKPKKGQEINYFTDLSVGDYVVHSMHGIGKYVGLKTIETEGIHRDYIEIAYAGTDRLYLPASNLDQLQKYIGNEGDVPRIHKMGGSDWRKAVTKAQKSIDDLADKLVELYAKREITEGFAFLPDQPWQQEFEDAFPYEETEDQLQATREIKESMERPTPMDRLLAGDVGFGKTEVAMRAIFKAVVSGKQVAVLVPTTVLAQQHYQTFLNRFNPFGVKVDVLNRFRSTAEKKEVLKGVENGSIDILIGTHSLLNKKVKFKDLGFLVVDEEQRFGVAQKEKWKEWASNIDVLTLSATPIPRTLHMSLVGVREMSVISTPPEDRLPVQTYVVEYDMNLIADAIKRELARGGQVYFVYNRVASINHMGELLEQALPDLRYAVAHGQMTGRQIEEIMTDFYEGHYDVLLSTSIIETGLDIPNANTIIIYDADRLGLSQLYQMRGRVGRSRRRAYAYFMYRPDKMLSEAAEKRLKAIEEFTELGAGFKLAMRDLEIRGAGNLLGSQQHGNIASVGFGMYVSMLEEAIAKAQNKEVVKEVVPDPAIDLEIDAFIDDAYIKDSARKISVYQRMLQIKNKAQLDDLTDELIDRFGTPTDPVDRLLRVAQIKEQARLLGVKSIVRRDGQLIIHWQDDSKMADWDMGAVREDLWKKMKFMDTKPASLYISLNGLKGSILTITEAVMKELSKKSKGGL*