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NECEvent2014_6_4_scaffold_208

Alias: 176_004_scaffold_208

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_208_1
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(102..1025)
DNA (924bp) protein (308aa)
Ribokinase (EC:2.7.1.15)
Ribokinase {ECO:0000313|EMBL:EFE59005.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EFE59005.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermi
Ribokinase {ECO:0000313|EMBL:EFE59005.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EFE59005.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermi
NECEvent2014_6_4_scaffold_208_2
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1079..1483)
DNA (405bp) protein (135aa)
D-ribose pyranase {ECO:0000255|HAMAP-Rule:MF_01661}; EC=5.4.99.62 {ECO:0000255|HAMAP-Rule:MF_01661};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
D-ribose pyranase {ECO:0000255|HAMAP-Rule:MF_01661}; EC=5.4.99.62 {ECO:0000255|HAMAP-Rule:MF_01661};; TaxID=176280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphyl
Ribose ABC transport system, high affinity permease RbsD (TC 3.A.1.2.1)
NECEvent2014_6_4_scaffold_208_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(1505..2386)
DNA (882bp) protein (294aa)
Sugar transport protein {ECO:0000313|EMBL:EFE59007.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Sugar transport protein {ECO:0000313|EMBL:EFE59007.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Putative ribose uptake protein RbsU, GRP transporter family (TC 2.A.7.5)
NECEvent2014_6_4_scaffold_208_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2642..4246)
DNA (1605bp) protein (535aa)
Putative gamma-glutamyltransferase {ECO:0000313|EMBL:EFE59008.1}; EC=2.3.2.2 {ECO:0000313|EMBL:EFE59008.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
Putative gamma-glutamyltransferase {ECO:0000313|EMBL:EFE59008.1}; EC=2.3.2.2 {ECO:0000313|EMBL:EFE59008.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
Gamma-glutamyltranspeptidase PgsD/CapD ,catalyses PGA anchorage to peptidoglycan (EC:2.3.2.2)
NECEvent2014_6_4_scaffold_208_5
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4249..4425)
DNA (177bp) protein (59aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAW52974.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
Uncharacterized protein {ECO:0000313|EMBL:AAW52974.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A)
NECEvent2014_6_4_scaffold_208_6

Not on your lists

comp(4400..5473)
DNA (1074bp) protein (358aa)
Poly-gamma-glutamate synthase subunit PgsA/CapA (EC:6.3.2.-)
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:ETJ17407.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Capsule biosynthesis protein CapA {ECO:0000313|EMBL:ETJ17407.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_208_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5497..5949)
DNA (453bp) protein (151aa)
capC; capC protein
CapC protein {ECO:0000313|EMBL:AAW52976.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
CapC protein {ECO:0000313|EMBL:AAW52976.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_6_4_scaffold_208_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(5951..7108)
DNA (1158bp) protein (386aa)
Poly-gamma-glutamate synthase PgsB {ECO:0000313|EMBL:EFE59012.1}; EC=6.3.2.- {ECO:0000313|EMBL:EFE59012.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
Poly-gamma-glutamate synthase PgsB {ECO:0000313|EMBL:EFE59012.1}; EC=6.3.2.- {ECO:0000313|EMBL:EFE59012.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="
pgsB; poly-gamma-glutamate synthase PgsB
NECEvent2014_6_4_scaffold_208_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

7557..7874
DNA (318bp) protein (106aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59013.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59013.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7946..8926)
DNA (981bp) protein (327aa)
esterase
Esterase, putative {ECO:0000313|EMBL:AAW52979.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
Esterase, putative {ECO:0000313|EMBL:AAW52979.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_6_4_scaffold_208_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9009..9857)
DNA (849bp) protein (283aa)
membrane protein, putative
Uncharacterized protein {ECO:0000313|EMBL:EFE59015.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59015.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10040..10366)
DNA (327bp) protein (109aa)
Thioredoxin
Uncharacterized protein {ECO:0000313|EMBL:EFE59016.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59016.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_13

Not on your lists

10589..11641
DNA (1053bp) protein (351aa)
alcohol dehydrogenase (EC:1.1.1.1)
Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:ETJ17414.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
Alcohol dehydrogenase, zinc-containing {ECO:0000313|EMBL:ETJ17414.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
NECEvent2014_6_4_scaffold_208_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11706..12473)
DNA (768bp) protein (256aa)
Membrane-bound protease, CAAX family
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFE59018.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EFE59018.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:
NECEvent2014_6_4_scaffold_208_15
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12535..12801)
DNA (267bp) protein (89aa)
PTS enzyme II glucose-specific transporter subunit factor IIABC
Uncharacterized protein {ECO:0000313|EMBL:EFE59019.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59019.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_16
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(12821..14848)
DNA (2028bp) protein (676aa)
ptsG; PTS system glucose-specific EIICBA component rbh
PTS system glucose-specific EIICBA component; EIICBA-Glc; Short=EII-Glc;; Includes:; Glucose permease IIC component; PTS system glucose-specific EIIC component; Includes:; Glucose-specific phosphotran
PTS system glucose-specific EIICBA component; EIICBA-Glc; Short=EII-Glc;; Includes:; Glucose permease IIC component; PTS system glucose-specific EIIC component; Includes:; Glucose-specific phosphotran
NECEvent2014_6_4_scaffold_208_17
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(15092..16831)
DNA (1740bp) protein (580aa)
Pyruvate oxidase {ECO:0000313|EMBL:AAW52992.1}; EC=1.2.3.3 {ECO:0000313|EMBL:AAW52992.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
Pyruvate oxidase {ECO:0000313|EMBL:AAW52992.1}; EC=1.2.3.3 {ECO:0000313|EMBL:AAW52992.1};; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epi
Pyruvate oxidase, CidC / Pyruvate oxidase [ubiquinone, cytochrome]
NECEvent2014_6_4_scaffold_208_18
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16881..17570)
DNA (690bp) protein (230aa)
CidA-associated membrane protein CidB
Holin-like protein CidB {ECO:0000313|EMBL:ETJ14687.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Holin-like protein CidB {ECO:0000313|EMBL:ETJ14687.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_6_4_scaffold_208_19
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(17567..17959)
DNA (393bp) protein (131aa)
lrgA family protein
Holin-like protein CidA {ECO:0000256|HAMAP-Rule:MF_01143}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Holin-like protein CidA {ECO:0000256|HAMAP-Rule:MF_01143}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_6_4_scaffold_208_20
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(18270..19154)
DNA (885bp) protein (295aa)
LysR family transcriptional regulator
LysR substrate binding domain protein {ECO:0000313|EMBL:EFE59024.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(gre
LysR substrate binding domain protein {ECO:0000313|EMBL:EFE59024.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(gre
NECEvent2014_6_4_scaffold_208_21
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19360..19557
DNA (198bp) protein (66aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59025.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59025.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

19815..20246
DNA (432bp) protein (144aa)
CHAP domain protein rbh
Secretory antigen SsaA-related protein {ECO:0000313|EMBL:AAW53005.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC
Secretory antigen SsaA-related protein {ECO:0000313|EMBL:AAW53005.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC
NECEvent2014_6_4_scaffold_208_23
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(20323..21600)
DNA (1278bp) protein (426aa)
hydroxymethylglutaryl-CoA reductase, degradative (EC:1.1.1.88) rbh
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=176279 sp
3-hydroxy-3-methylglutaryl coenzyme A reductase {ECO:0000256|RuleBase:RU361219}; Short=HMG-CoA reductase {ECO:0000256|RuleBase:RU361219};; EC=1.1.1.88 {ECO:0000256|RuleBase:RU361219};; TaxID=176279 sp
NECEvent2014_6_4_scaffold_208_24
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21845..23011
DNA (1167bp) protein (389aa)
hydroxymethylglutaryl-CoA synthase (EC:2.3.3.10)
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ETJ13263.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
Hydroxymethylglutaryl-CoA synthase {ECO:0000313|EMBL:ETJ13263.1}; TaxID=1403935 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. DORA_6_22.;"
NECEvent2014_6_4_scaffold_208_25
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(23263..23781)
DNA (519bp) protein (173aa)
Methylated-DNA--protein-cysteine methyltransferase (EC:2.1.1.63)
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EFE59029.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EFE59029.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Baci
6-O-methylguanine DNA methyltransferase, DNA binding domain protein {ECO:0000313|EMBL:EFE59029.1}; EC=2.1.1.63 {ECO:0000313|EMBL:EFE59029.1};; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Baci
NECEvent2014_6_4_scaffold_208_26
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24086..24550)
DNA (465bp) protein (155aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59030.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59030.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_27
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24733..24915)
DNA (183bp) protein (61aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EFE59031.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Uncharacterized protein {ECO:0000313|EMBL:EFE59031.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_28
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(24930..26924)
DNA (1995bp) protein (665aa)
feoB protein
Ferrous iron transport protein B {ECO:0000313|EMBL:EFE59032.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
Ferrous iron transport protein B {ECO:0000313|EMBL:EFE59032.1}; TaxID=525375 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis M23864:W2(grey).;"
NECEvent2014_6_4_scaffold_208_29
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(26930..27157)
DNA (228bp) protein (76aa)
hypothetical protein
FeoA family protein {ECO:0000313|EMBL:AAW53019.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
FeoA family protein {ECO:0000313|EMBL:AAW53019.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_6_4_scaffold_208_30
Staphylococcus sp. DORA_6_22, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(27452..28996)
DNA (1545bp) protein (515aa)
Delta-1-pyrroline-5-carboxylate dehydrogenase (EC:1.2.1.88)
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00733}; Short=P5C dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00733};; EC=1.2.1.88 {ECO:0000256|HAMAP-Rule:MF_00733};; L-glutamate gamma
1-pyrroline-5-carboxylate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00733}; Short=P5C dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00733};; EC=1.2.1.88 {ECO:0000256|HAMAP-Rule:MF_00733};; L-glutamate gamma
Displaying items 1-30 of 38 in total

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