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NECEvent2014_6_4_scaffold_507

Alias: 176_004_scaffold_507

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_507_1
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(862..1161)
DNA (300bp) protein (100aa)
hypothetical protein
Staphylococcus haemolyticus JCSC1435 DNA, complete genome {ECO:0000313|EMBL:BAE05700.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemo
Staphylococcus haemolyticus JCSC1435 DNA, complete genome {ECO:0000313|EMBL:BAE05700.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemo
NECEvent2014_6_4_scaffold_507_2
unknown

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comp(1423..2097)
DNA (675bp) protein (225aa)
hypothetical protein
NECEvent2014_6_4_scaffold_507_3
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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2624..3103
DNA (480bp) protein (160aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EES37051.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
Uncharacterized protein {ECO:0000313|EMBL:EES37051.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.;"
NECEvent2014_6_4_scaffold_507_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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3118..3510
DNA (393bp) protein (131aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV20036.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Uncharacterized protein {ECO:0000313|EMBL:ESV20036.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
NECEvent2014_6_4_scaffold_507_5
Staphylococcus massiliensis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4064..4393
DNA (330bp) protein (110aa)
Integrase {ECO:0000313|EMBL:EKU46397.1}; TaxID=1229783 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus massiliensis S46.;"
Integrase {ECO:0000313|EMBL:EKU46397.1}; TaxID=1229783 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus massiliensis S46.;"
integrase
NECEvent2014_6_4_scaffold_507_6
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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4416..5009
DNA (594bp) protein (198aa)
Integrase, superantigen-encoding pathogenicity islands SaPI
Integrase {ECO:0000313|EMBL:AEU08363.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
Integrase {ECO:0000313|EMBL:AEU08363.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
NECEvent2014_6_4_scaffold_507_7
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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comp(5349..6968)
DNA (1620bp) protein (540aa)
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=525376 speci
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=525376 speci
Heat shock protein 60 family chaperone GroEL
NECEvent2014_6_4_scaffold_507_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7024..7308)
DNA (285bp) protein (95aa)
Heat shock protein 60 family co-chaperone GroES
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=525376 speci
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=525376 speci
NECEvent2014_6_4_scaffold_507_9
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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7483..8223
DNA (741bp) protein (247aa)
hypothetical protein
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EES37057.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.
CAAX amino terminal protease family protein {ECO:0000313|EMBL:EES37057.1}; TaxID=525376 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis W23144.
NECEvent2014_6_4_scaffold_507_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8283..9701)
DNA (1419bp) protein (473aa)
sdrH; sdrH protein
SdrH protein {ECO:0000313|EMBL:AAW54812.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
SdrH protein {ECO:0000313|EMBL:AAW54812.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 35984 / RP62A).;"
NECEvent2014_6_4_scaffold_507_11
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

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10044..10838
DNA (795bp) protein (265aa)
carbon-nitrogen family hydrolase
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:AAW54813.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 3598
Hydrolase, carbon-nitrogen family {ECO:0000313|EMBL:AAW54813.1}; TaxID=176279 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis (strain ATCC 3598
NECEvent2014_6_4_scaffold_507_12
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

11586..12176
DNA (591bp) protein (197aa)
Accessory gene regulator protein B {ECO:0000256|HAMAP-Rule:MF_00784}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00784};; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" so
Accessory gene regulator protein B {ECO:0000256|HAMAP-Rule:MF_00784}; EC=3.4.-.- {ECO:0000256|HAMAP-Rule:MF_00784};; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" so
accessory regulator B family protein
NECEvent2014_6_4_scaffold_507_13
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12182..12322
DNA (141bp) protein (47aa)
cyclic lactone autoinducer peptide family protein
AgrD {ECO:0000313|EMBL:AAL65842.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
AgrD {ECO:0000313|EMBL:AAL65842.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
NECEvent2014_6_4_scaffold_507_14
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12347..13078
DNA (732bp) protein (244aa)
histidine kinase-, DNA gyrase B-, and HSP90-like ATPase family protein
Histidine kinase {ECO:0000313|EMBL:ESV20046.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Histidine kinase {ECO:0000313|EMBL:ESV20046.1}; TaxID=1344987 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis WI09.;"
Displaying 14 items

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