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NECEvent2014_6_4_scaffold_377

Alias: 176_004_scaffold_377

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_377_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(56..1237)
DNA (1182bp) protein (394aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96745.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein {ECO:0000313|EMBL:EEH96745.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
spore coat polysaccharide biosynthesis protein SpsC
NECEvent2014_6_4_scaffold_377_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1436..2431
DNA (996bp) protein (332aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96862.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein {ECO:0000313|EMBL:EEH96862.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cell envelope-related function transcriptional attenuator
NECEvent2014_6_4_scaffold_377_3
Leptotrichia hofstadii, Leptotrichia, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(2541..3230)
DNA (690bp) protein (230aa)
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EEX73591.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EEX73591.1};; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrich
L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EEX73591.1}; EC=5.1.3.4 {ECO:0000313|EMBL:EEX73591.1};; TaxID=634994 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Leptotrich
L-ribulose-5-phosphate 4-epimerase
NECEvent2014_6_4_scaffold_377_4
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3224..4291)
DNA (1068bp) protein (356aa)
dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase
dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase {ECO:0000313|EMBL:AGC67184.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium
dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase {ECO:0000313|EMBL:AGC67184.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium
NECEvent2014_6_4_scaffold_377_5
Eubacterium acidaminophilum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4300..5010)
DNA (711bp) protein (237aa)
ispD4; 2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase IspD (EC:2.7.7.60)
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000
2-C-methyl-D-erythritol 4-phosphate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00108}; EC=2.7.7.60 {ECO:0000256|HAMAP-Rule:MF_00108};; 4-diphosphocytidyl-2C-methyl-D-erythritol synthase {ECO:0000
NECEvent2014_6_4_scaffold_377_6
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(5025..6425)
DNA (1401bp) protein (467aa)
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CDC91573.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium
Membrane protein involved in the export of O-antigen and teichoic acid {ECO:0000313|EMBL:CDC91573.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium
Membrane protein involved in the export of O-antigen and teichoic acid
NECEvent2014_6_4_scaffold_377_7
Acidaminococcus fermentans, Acidaminococcus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

comp(6428..7249)
DNA (822bp) protein (274aa)
LicD family protein
LicD family protein {ECO:0000313|EMBL:ADB47133.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans
LicD family protein {ECO:0000313|EMBL:ADB47133.1}; TaxID=591001 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Acidaminococcaceae; Acidaminococcus.;" source="Acidaminococcus fermentans
NECEvent2014_6_4_scaffold_377_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7470..8408)
DNA (939bp) protein (313aa)
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDB14148.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;"
Glycosyltransferase group 2 family protein {ECO:0000313|EMBL:CDB14148.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;"
hypothetical protein
NECEvent2014_6_4_scaffold_377_9
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8417..8905)
DNA (489bp) protein (163aa)
Uncharacterized protein {ECO:0000313|EMBL:EKQ56656.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
Uncharacterized protein {ECO:0000313|EMBL:EKQ56656.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
glycosyltransferase family 28 protein
NECEvent2014_6_4_scaffold_377_10
unknown

Not on your lists

comp(8920..10221)
DNA (1302bp) protein (434aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_377_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10239..12011)
DNA (1773bp) protein (591aa)
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:EKQ56655.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase {ECO:0000313|EMBL:EKQ56655.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
UDP-N-acetylglucosamine:LPS N-acetylglucosamine transferase
NECEvent2014_6_4_scaffold_377_12
Bacillus megaterium, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11995..13014)
DNA (1020bp) protein (340aa)
family 2 glycosyl transferase
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ADF37978.1}; TaxID=592022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain DSM 319).;"
Glycosyl transferase, family 2 {ECO:0000313|EMBL:ADF37978.1}; TaxID=592022 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus megaterium (strain DSM 319).;"
NECEvent2014_6_4_scaffold_377_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13278..13934)
DNA (657bp) protein (219aa)
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EEH96849.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
Exopolysaccharide biosynthesis polyprenyl glycosylphosphotransferase {ECO:0000313|EMBL:EEH96849.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;
glycosyltransferase
NECEvent2014_6_4_scaffold_377_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14334..14507)
DNA (174bp) protein (58aa)
M6 family metalloprotease domain-containing protein {ECO:0000313|EMBL:EEH96848.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_6_4_scaffold_377_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14648..15607
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96847.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein {ECO:0000313|EMBL:EEH96847.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cell envelope-related function transcriptional attenuator common domain protein
NECEvent2014_6_4_scaffold_377_16
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15683..17137)
DNA (1455bp) protein (485aa)
Uncharacterized protein {ECO:0000313|EMBL:KIE46030.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
Uncharacterized protein {ECO:0000313|EMBL:KIE46030.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.
NECEvent2014_6_4_scaffold_377_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17152..18609)
DNA (1458bp) protein (486aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96845.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Uncharacterized protein {ECO:0000313|EMBL:EEH96845.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
Displaying 17 items

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