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NECEvent2014_6_4_scaffold_163

Alias: 176_004_scaffold_163

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_163_1
[Clostridium] stercorarium, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26..1561)
DNA (1536bp) protein (512aa)
recombinase
Recombinase {ECO:0000313|EMBL:AGC69112.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercor
Recombinase {ECO:0000313|EMBL:AGC69112.1}; TaxID=1121335 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="Clostridium stercorarium subsp. stercor
NECEvent2014_6_4_scaffold_163_2
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1590..2048)
DNA (459bp) protein (153aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ01646.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Uncharacterized protein {ECO:0000313|EMBL:ENZ01646.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
gp23-like protein
NECEvent2014_6_4_scaffold_163_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2074..2622)
DNA (549bp) protein (183aa)
phage repressor
Putative phage protein {ECO:0000313|EMBL:CDH91698.1}; Putative phage repressor {ECO:0000313|EMBL:ACD22623.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
Putative phage protein {ECO:0000313|EMBL:CDH91698.1}; Putative phage repressor {ECO:0000313|EMBL:ACD22623.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clo
NECEvent2014_6_4_scaffold_163_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2785..3015
DNA (231bp) protein (77aa)
Uncharacterized protein {ECO:0000313|EMBL:EDT16329.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDT16329.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1
hypothetical protein
NECEvent2014_6_4_scaffold_163_5
unknown

Not on your lists

3093..3296
DNA (204bp) protein (68aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_6
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3377..4144
DNA (768bp) protein (256aa)
Putative antirepressor,ORF6C domain {ECO:0000313|EMBL:CEK35727.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium s
Putative antirepressor,ORF6C domain {ECO:0000313|EMBL:CEK35727.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium s
putative antirepressor
NECEvent2014_6_4_scaffold_163_7
unknown

Not on your lists

4146..4472
DNA (327bp) protein (109aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_8
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

4491..4763
DNA (273bp) protein (91aa)
Uncharacterized protein {ECO:0000313|EMBL:EJS62014.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-
Uncharacterized protein {ECO:0000313|EMBL:EJS62014.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-
phage protein
NECEvent2014_6_4_scaffold_163_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4732..4950)
DNA (219bp) protein (73aa)
Uncharacterized protein {ECO:0000313|EMBL:KEH93250.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1
Uncharacterized protein {ECO:0000313|EMBL:KEH93250.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1
hypothetical protein
NECEvent2014_6_4_scaffold_163_10
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5022..5288
DNA (267bp) protein (89aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX43992.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
Uncharacterized protein {ECO:0000313|EMBL:AGX43992.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_4_scaffold_163_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5493..5705
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:AJD29229.1}; TaxID=1408284 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum Prevot_594.;
NECEvent2014_6_4_scaffold_163_12
unknown

Not on your lists

5733..5888
DNA (156bp) protein (52aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_13
unknown

Not on your lists

5891..6004
DNA (114bp) protein (38aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_14
unknown

Not on your lists

5962..6258
DNA (297bp) protein (99aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6271..6780
DNA (510bp) protein (170aa)
Bacteriophage Mu Gam like family protein {ECO:0000313|EMBL:AIY78581.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botul
Bacteriophage Mu Gam like family protein {ECO:0000313|EMBL:AIY78581.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botul
hypothetical protein
NECEvent2014_6_4_scaffold_163_16
unknown

Not on your lists

6783..6926
DNA (144bp) protein (48aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6937..7461
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:EDS81428.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
Uncharacterized protein {ECO:0000313|EMBL:EDS81428.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1
hypothetical protein
NECEvent2014_6_4_scaffold_163_18
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7471..8247
DNA (777bp) protein (259aa)
Phage replication initiation protein {ECO:0000313|EMBL:EHN15514.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogene
Phage replication initiation protein {ECO:0000313|EMBL:EHN15514.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogene
phage replication initiation protein
NECEvent2014_6_4_scaffold_163_19
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8213..8950
DNA (738bp) protein (246aa)
Phage protein {ECO:0000313|EMBL:CDB14628.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:2
Phage protein {ECO:0000313|EMBL:CDB14628.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:2
phage protein
NECEvent2014_6_4_scaffold_163_20
Clostridium phage phiCP26F, Caudovirales, Viruses

Not on your lists

8964..9518
DNA (555bp) protein (185aa)
Putative uncharacterized protein phi26F_gp49 {ECO:0000313|EMBL:AEA86273.1}; TaxID=673376 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCP26F
Putative uncharacterized protein phi26F_gp49 {ECO:0000313|EMBL:AEA86273.1}; TaxID=673376 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCP26F
NECEvent2014_6_4_scaffold_163_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9511..9903
DNA (393bp) protein (131aa)
Uncharacterized protein {ECO:0000313|EMBL:EKQ56311.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
Uncharacterized protein {ECO:0000313|EMBL:EKQ56311.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-2
hypothetical protein
NECEvent2014_6_4_scaffold_163_22
unknown

Not on your lists

9903..10139
DNA (237bp) protein (79aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10114..10458
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:EES51258.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
Uncharacterized protein {ECO:0000313|EMBL:EES51258.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT
hypothetical protein
NECEvent2014_6_4_scaffold_163_24
Firmicutes bacterium CAG:137, Firmicutes, Bacteria

Not on your lists

10541..10927
DNA (387bp) protein (129aa)
Gp50 {ECO:0000313|EMBL:CDB29257.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Gp50 {ECO:0000313|EMBL:CDB29257.1}; TaxID=1263004 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:137.;"
Gp50
NECEvent2014_6_4_scaffold_163_25
Firmicutes bacterium CAG:102, Firmicutes, Bacteria

Not on your lists

10917..11243
DNA (327bp) protein (109aa)
Uncharacterized protein {ECO:0000313|EMBL:CCX39145.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
Uncharacterized protein {ECO:0000313|EMBL:CCX39145.1}; TaxID=1262998 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:102.;"
hypothetical protein
NECEvent2014_6_4_scaffold_163_26
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11233..11595
DNA (363bp) protein (121aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ96946.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
Uncharacterized protein {ECO:0000313|EMBL:KJZ96946.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
NECEvent2014_6_4_scaffold_163_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11588..12004
DNA (417bp) protein (139aa)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=457396 species="Bacteria; Firmicutes; Clostrid
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=457396 species="Bacteria; Firmicutes; Clostrid
ssb; single-stranded DNA-binding family protein
NECEvent2014_6_4_scaffold_163_28
Clostridium cellulovorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12062..12649
DNA (588bp) protein (196aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADL53239.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
Uncharacterized protein {ECO:0000313|EMBL:ADL53239.1}; TaxID=573061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cellulovorans (strain A
NECEvent2014_6_4_scaffold_163_29
unknown

Not on your lists

12637..12822
DNA (186bp) protein (62aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_163_30
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12831..13613
DNA (783bp) protein (261aa)
Uncharacterized protein {ECO:0000313|EMBL:KEH90600.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1
Uncharacterized protein {ECO:0000313|EMBL:KEH90600.1}; TaxID=1443126 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. It1
hypothetical protein
Displaying items 1-30 of 80 in total

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