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NECEvent2014_6_4_scaffold_387

Alias: 176_004_scaffold_387

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_4_scaffold_387_1
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2..280
DNA (279bp) protein (93aa)
clfB; clumping factor B
Plasmin sensitive surface protein {ECO:0000313|EMBL:AFI61338.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
Plasmin sensitive surface protein {ECO:0000313|EMBL:AFI61338.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus aureus.;"
NECEvent2014_6_4_scaffold_387_2
Staphylococcus haemolyticus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

395..2011
DNA (1617bp) protein (539aa)
hypothetical protein
Staphylococcus haemolyticus JCSC1435 DNA, complete genome {ECO:0000313|EMBL:BAE05734.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemo
Staphylococcus haemolyticus JCSC1435 DNA, complete genome {ECO:0000313|EMBL:BAE05734.1}; TaxID=279808 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus haemo
NECEvent2014_6_4_scaffold_387_3
Staphylococcus aureus, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2021..2194
DNA (174bp) protein (58aa)
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase {ECO:0000313|EMBL:ACZ59059.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" sour
UDP-N-acetylmuramoylalanyl-D-glutamyl-2, 6-diaminopimelate-D-alanyl-D-alanyl ligase {ECO:0000313|EMBL:ACZ59059.1}; TaxID=1280 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" sour
hypothetical protein
NECEvent2014_6_4_scaffold_387_4
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

2908..3780
DNA (873bp) protein (291aa)
Uncharacterized protein {ECO:0000313|EMBL:ADA80174.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
Uncharacterized protein {ECO:0000313|EMBL:ADA80174.1}; TaxID=1282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis.;"
hypothetical protein
NECEvent2014_6_4_scaffold_387_5
Vibrio vulnificus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4327..4617)
DNA (291bp) protein (97aa)
Uncharacterized protein {ECO:0000313|EMBL:KFK55753.1}; TaxID=672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vulnificus.;"
Uncharacterized protein {ECO:0000313|EMBL:KFK55753.1}; TaxID=672 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio vulnificus.;"
hypothetical protein
NECEvent2014_6_4_scaffold_387_6
Enterococcus faecalis, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(4598..6625)
DNA (2028bp) protein (676aa)
PHP N-terminal domain protein {ECO:0000313|EMBL:EFT44278.1}; TaxID=749497 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0017
PHP N-terminal domain protein {ECO:0000313|EMBL:EFT44278.1}; TaxID=749497 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus faecalis TX0017
hypothetical protein
NECEvent2014_6_4_scaffold_387_7
Staphylococcus pasteuri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6933..7235
DNA (303bp) protein (101aa)
putative transposon DNA-invertase bin3
Resolvase domain-containing protein {ECO:0000313|EMBL:AGZ25719.1}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
Resolvase domain-containing protein {ECO:0000313|EMBL:AGZ25719.1}; TaxID=1276282 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pasteuri SP1.;"
NECEvent2014_6_4_scaffold_387_8
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(7990..8430)
DNA (441bp) protein (147aa)
hypothetical protein
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
NECEvent2014_6_4_scaffold_387_9
unknown

Not on your lists

comp(8432..8890)
DNA (459bp) protein (153aa)
putative membrane protein
NECEvent2014_6_4_scaffold_387_10
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(8944..9384)
DNA (441bp) protein (147aa)
putative membrane protein
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
NECEvent2014_6_4_scaffold_387_11
Methanosarcina sp. Kolksee, Methanosarcina, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(9400..10041)
DNA (642bp) protein (214aa)
CAAX protease self-immunity family protein rbh
CAAX amino terminal protease family protein {ECO:0000313|EMBL:AKB45911.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sour
CAAX amino terminal protease family protein {ECO:0000313|EMBL:AKB45911.1}; TaxID=1434099 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanosarcina.;" sour
NECEvent2014_6_4_scaffold_387_12
Staphylococcus pseudintermedius, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10374..11129)
DNA (756bp) protein (252aa)
ABC-2 transporter family protein rbh
Membrane spanning protein {ECO:0000313|EMBL:ADV05230.1}; TaxID=937773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pseudintermedius (strain HKU10-03).;"
Membrane spanning protein {ECO:0000313|EMBL:ADV05230.1}; TaxID=937773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pseudintermedius (strain HKU10-03).;"
NECEvent2014_6_4_scaffold_387_13
Staphylococcus pseudintermedius, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11129..11992)
DNA (864bp) protein (288aa)
ABC transporter family protein rbh
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ADV05229.1}; TaxID=937773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pseudinte
ABC-type multidrug transport system, ATPase component {ECO:0000313|EMBL:ADV05229.1}; TaxID=937773 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus pseudinte
NECEvent2014_6_4_scaffold_387_14
Staphylococcus cohnii, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12090..13802
DNA (1713bp) protein (571aa)
ABC transporter family protein rbh
Antibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKD25581.1}; TaxID=74704 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus cohnii subsp. coh
Antibiotic ABC transporter ATP-binding protein {ECO:0000313|EMBL:KKD25581.1}; TaxID=74704 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus cohnii subsp. coh
NECEvent2014_6_4_scaffold_387_15
Staphylococcus sp. OJ82, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

13877..14083
DNA (207bp) protein (69aa)
TM2 domain protein
Putative helix-turn-helix containing protein {ECO:0000313|EMBL:EJX16522.1}; TaxID=1202667 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. OJ82.;"
Putative helix-turn-helix containing protein {ECO:0000313|EMBL:EJX16522.1}; TaxID=1202667 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. OJ82.;"
NECEvent2014_6_4_scaffold_387_16
Anaerostipes caccae, Anaerostipes, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14208..14549
DNA (342bp) protein (114aa)
bacterial regulatory s, gntR family protein
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDR99127.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes cacca
Transcriptional regulator, GntR family {ECO:0000313|EMBL:EDR99127.1}; TaxID=411490 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Anaerostipes.;" source="Anaerostipes cacca
NECEvent2014_6_4_scaffold_387_17
Streptococcus pneumoniae, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(14881..15084)
DNA (204bp) protein (68aa)
Delta protein {ECO:0000313|EMBL:CRG01648.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
Delta protein {ECO:0000313|EMBL:CRG01648.1}; TaxID=1313 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus pneumoniae.;"
putative plasmid replication-associated protein
NECEvent2014_6_4_scaffold_387_18
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15295..15540
DNA (246bp) protein (82aa)
hypothetical protein
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
NECEvent2014_6_4_scaffold_387_19
Staphylococcus sp. OJ82, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15556..16152
DNA (597bp) protein (199aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:EJX19244.1}; TaxID=1202667 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. OJ82.;"
Uncharacterized protein {ECO:0000313|EMBL:EJX19244.1}; TaxID=1202667 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus sp. OJ82.;"
NECEvent2014_6_4_scaffold_387_20
Staphylococcus warneri, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

16351..17241
DNA (891bp) protein (297aa)
hypothetical protein rbh
Uncharacterized protein {ECO:0000313|EMBL:AGC89427.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
Uncharacterized protein {ECO:0000313|EMBL:AGC89427.1}; TaxID=1194526 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus warneri (strain SG1).;"
NECEvent2014_6_4_scaffold_387_21
unknown

Not on your lists

comp(17186..17380)
DNA (195bp) protein (65aa)

This feature has no annotations

NECEvent2014_6_4_scaffold_387_22
Staphylococcus epidermidis, Staphylococcus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

17647..17958
DNA (312bp) protein (104aa)
hypothetical protein
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
Uncharacterized protein; TaxID=979214 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus.;" source="Staphylococcus epidermidis NIHLM031.;"
NECEvent2014_6_4_scaffold_387_23
unknown

Not on your lists

18207..18305
DNA (99bp) protein (33aa)
hypothetical protein
Displaying 23 items

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