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NECEvent2014_6_5_scaffold_227

Alias: 176_005_scaffold_227

Search features with annotation key words

Displaying 24 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_227_1
Clostridium novyi, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..1059)
DNA (1059bp) protein (353aa)
Alpha-glucosidase {ECO:0000313|EMBL:KGN03135.1}; TaxID=1444290 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium novyi A str. 4570.;"
alpha-glucosidase
NECEvent2014_6_5_scaffold_227_2
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

1340..2572
DNA (1233bp) protein (411aa)
Uncharacterized protein {ECO:0000313|EMBL:EFF64039.1}; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Turicibacter.;" source="Turicibacter sangu
transcriptional regulator/TPR domain-containing protein
NECEvent2014_6_5_scaffold_227_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2815..4614)
DNA (1800bp) protein (600aa)
ade; adenine deaminase (EC:3.5.4.2)
Adenine deaminase {ECO:0000256|HAMAP-Rule:MF_01518, ECO:0000256|SAAS:SAAS00006067}; Short=Adenase {ECO:0000256|HAMAP-Rule:MF_01518};; Short=Adenine aminase {ECO:0000256|HAMAP-Rule:MF_01518};; EC=3.5.4
NECEvent2014_6_5_scaffold_227_4
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4721..6052)
DNA (1332bp) protein (444aa)
mate efflux family protein
MATE efflux family protein {ECO:0000313|EMBL:AIY78829.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
NECEvent2014_6_5_scaffold_227_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6158..6763)
DNA (606bp) protein (202aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU71124.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_5_scaffold_227_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6993..7460
DNA (468bp) protein (156aa)
greA2; transcription elongation factor GreA
Transcription elongation factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; Transcript cleavage factor GreA {ECO:0000256|HAMAP-Rule:MF_00105}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clos
NECEvent2014_6_5_scaffold_227_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7502..8386)
DNA (885bp) protein (295aa)
ROK family protein
ROK family protein {ECO:0000313|EMBL:AIY84757.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
NECEvent2014_6_5_scaffold_227_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8408..9205)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97125.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
SIS domain protein
NECEvent2014_6_5_scaffold_227_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9268..11889)
DNA (2622bp) protein (874aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97124.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_227_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11972..13942)
DNA (1971bp) protein (657aa)
fruA; PTS system, fructose subfamily, IIA component domain protein (EC:2.7.1.69)
PTS system, Fru family, IIC component {ECO:0000313|EMBL:EEH97123.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_4
NECEvent2014_6_5_scaffold_227_11
Desulfosporosinus sp. HMP52, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14112..14435)
DNA (324bp) protein (108aa)
Acetyltransferase {ECO:0000313|EMBL:KGK86275.1}; TaxID=1487923 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfosporosinus sp. HMP52.;"
acetyltransferase
NECEvent2014_6_5_scaffold_227_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14487..16241)
DNA (1755bp) protein (585aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|SAAS:SAAS00085897, ECO:0000313|EMBL:AIY79552.1}; EC=2.2.1.7 {ECO:0000256|SAAS:SAAS00085897, ECO:0000313|EMBL:AIY79552.1};; TaxID=1415774 species="B
1-deoxy-D-xylulose-5-phosphate synthase
NECEvent2014_6_5_scaffold_227_13
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16404..18455)
DNA (2052bp) protein (684aa)
Chitinase {ECO:0000313|EMBL:BAD12045.1}; EC=3.2.1.14 {ECO:0000313|EMBL:BAD12045.1};; Chitinase 18C {ECO:0000313|EMBL:BAD29950.1}; EC=3.2.1.14 {ECO:0000313|EMBL:BAD29950.1};; TaxID=29363 species="Bacte
glycoside hydrolase family protein
NECEvent2014_6_5_scaffold_227_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18710..19675)
DNA (966bp) protein (322aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
dihydrouridine synthase family protein
NECEvent2014_6_5_scaffold_227_15
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19817..24775)
DNA (4959bp) protein (1653aa)
AAA ATPase {ECO:0000313|EMBL:ERK31212.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_5_scaffold_227_16
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24787..26841)
DNA (2055bp) protein (685aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK30153.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
hypothetical protein
NECEvent2014_6_5_scaffold_227_17
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26847..27476)
DNA (630bp) protein (210aa)
hypothetical protein
Ubiquinone biosynthesis hydroxylase {ECO:0000313|EMBL:ERK30964.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinal
NECEvent2014_6_5_scaffold_227_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27615..32324)
DNA (4710bp) protein (1570aa)
F5/8 type C domain protein {ECO:0000313|EMBL:EKY26887.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
alpha-N-acetylgalactosaminidase
NECEvent2014_6_5_scaffold_227_19
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32722..33351)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY29666.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_5_scaffold_227_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33394..34605)
DNA (1212bp) protein (404aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB16916.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_5_scaffold_227_21
Clostridium sp. CAG:413, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34617..35489)
DNA (873bp) protein (291aa)
Methyltransferase type 11 {ECO:0000313|EMBL:CDC08840.1}; TaxID=1262803 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridi
methyltransferase type 11
NECEvent2014_6_5_scaffold_227_22
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35648..35926)
DNA (279bp) protein (93aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR35527.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
NECEvent2014_6_5_scaffold_227_23
unknown

Not on your lists

36037..36771
DNA (735bp) protein (245aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_227_24
unknown

Not on your lists

36928..37107
DNA (180bp) protein (60aa)

This feature has no annotations

Displaying 24 items

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