ggKbase home page

NECEvent2014_6_5_scaffold_281

Alias: 176_005_scaffold_281

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_281_1
[Clostridium] spiroforme, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2..2785)
DNA (2784bp) protein (928aa)
BNR/Asp-box repeat protein {ECO:0000313|EMBL:EDS74691.1}; TaxID=428126 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clos
hypothetical protein
NECEvent2014_6_5_scaffold_281_2
Coprococcus catus, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3046..3837)
DNA (792bp) protein (264aa)
Predicted permeases
Predicted permeases {ECO:0000313|EMBL:CBK80116.1}; TaxID=717962 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus catus GD/7.;"
NECEvent2014_6_5_scaffold_281_3
Hungatella hathewayi, Hungatella, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3929..5290)
DNA (1362bp) protein (454aa)
Uncharacterized protein {ECO:0000313|EMBL:EHI61802.1}; TaxID=742737 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Hungatella.;" source="Hungatella hathewayi WAL-18680.;"
sulfatase
NECEvent2014_6_5_scaffold_281_4
unknown

Not on your lists

comp(5310..5849)
DNA (540bp) protein (180aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_281_5
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5862..6353)
DNA (492bp) protein (164aa)
PTS system, glucose subfamily, IIA subunit
PTS system, glucose subfamily, IIA subunit {ECO:0000313|EMBL:ABR35885.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beij
NECEvent2014_6_5_scaffold_281_6
Fusobacterium mortiferum, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(6420..8006)
DNA (1587bp) protein (529aa)
Putative PTS system maltose-and glucose-specific EIICB component {ECO:0000313|EMBL:EEO34940.1}; TaxID=469616 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source
PTS system glucose-like transporter subunit IIB
NECEvent2014_6_5_scaffold_281_7
Sebaldella termitidis, Sebaldella, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(8044..9582)
DNA (1539bp) protein (513aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACZ08580.1}; TaxID=526218 species="Bacteria; Fusobacteria; Fusobacteriales; Leptotrichiaceae; Sebaldella.;" source="Sebaldella termitidis (strain ATCC 33386 /
NECEvent2014_6_5_scaffold_281_8
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(9666..10409)
DNA (744bp) protein (248aa)
N-acylglucosamine-6-phosphate 2-epimerase {ECO:0000256|SAAS:SAAS00074327}; EC=5.1.3.9 {ECO:0000256|SAAS:SAAS00074327};; TaxID=469617 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae;
N-acetylmannosamine-6-phosphate 2-epimerase
NECEvent2014_6_5_scaffold_281_9
Clostridium sp. ASBs410, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10559..11281
DNA (723bp) protein (241aa)
Transcriptional regulator {ECO:0000313|EMBL:EXG86843.1}; TaxID=1304866 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ASBs410.;"
GntR family transcriptional regulator
NECEvent2014_6_5_scaffold_281_10
Desulfosporosinus orientis, Desulfosporosinus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12326..12673)
DNA (348bp) protein (116aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AET69322.1}; Flags: Precursor;; TaxID=768706 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptococcaceae; Desulfosporosinus.;" source="Desulfos
NECEvent2014_6_5_scaffold_281_11
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12710..13015)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI96821.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlet
hypothetical protein
NECEvent2014_6_5_scaffold_281_12
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(12993..13805)
DNA (813bp) protein (271aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW05584.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
Zn-dependent hydrolase
NECEvent2014_6_5_scaffold_281_13
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13823..15214)
DNA (1392bp) protein (464aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW05583.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
PTS fructose transporter subunit IIB
NECEvent2014_6_5_scaffold_281_14
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15290..16138)
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:EFW05582.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp.
licT; transcription antiterminator LicT
NECEvent2014_6_5_scaffold_281_15
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16152..16598)
DNA (447bp) protein (149aa)
PTS system, beta-glucoside-specific IIABC subunit {ECO:0000313|EMBL:EHI99007.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EHI99007.1};; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
PTS system beta-glucoside-specific transporter subunit IIABC
NECEvent2014_6_5_scaffold_281_16
unknown

Not on your lists

comp(16978..17772)
DNA (795bp) protein (265aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_281_17
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17922..18311)
DNA (390bp) protein (130aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase
NECEvent2014_6_5_scaffold_281_18
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18494..21121)
DNA (2628bp) protein (876aa)
Uncharacterized protein {ECO:0000313|EMBL:EGN41542.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
PTS system transcriptional activator
NECEvent2014_6_5_scaffold_281_19
Lachnospiraceae bacterium 2_1_46FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21169..21573)
DNA (405bp) protein (135aa)
Uncharacterized protein {ECO:0000313|EMBL:EGG81890.1}; TaxID=742723 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_46FAA.;"
amidohydrolase
NECEvent2014_6_5_scaffold_281_20
Firmicutes bacterium CAG:424, Firmicutes, Bacteria

Not on your lists

comp(21513..22769)
DNA (1257bp) protein (419aa)
Uncharacterized protein {ECO:0000313|EMBL:CDC43686.1}; TaxID=1263022 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:424.;"
exoenzyme regulatory protein AepA
NECEvent2014_6_5_scaffold_281_21
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22766..23614)
DNA (849bp) protein (283aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY23241.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_5_scaffold_281_22
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23651..25117)
DNA (1467bp) protein (489aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
Uncharacterized protein {ECO:0000313|EMBL:EGN41543.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
NECEvent2014_6_5_scaffold_281_23
Lachnospiraceae bacterium 28-4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25120..26556)
DNA (1437bp) protein (479aa)
Uncharacterized protein {ECO:0000313|EMBL:EOS29729.1}; TaxID=397287 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 28-4.;"
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase
NECEvent2014_6_5_scaffold_281_24
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26573..27757)
DNA (1185bp) protein (395aa)
Uncharacterized protein {ECO:0000313|EMBL:EGN41544.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_281_25
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27829..29142)
DNA (1314bp) protein (438aa)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
celB.2; PTS system cellobiose-specific transporter subunit IIC
NECEvent2014_6_5_scaffold_281_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29159..29455)
DNA (297bp) protein (99aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
Uncharacterized protein {ECO:0000313|EMBL:EGN41546.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
NECEvent2014_6_5_scaffold_281_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29468..29779)
DNA (312bp) protein (104aa)
celC.2; PTS system cellobiose-specific transporter subunit IIA (EC:2.7.1.69)
Uncharacterized protein {ECO:0000313|EMBL:ETD18055.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
NECEvent2014_6_5_scaffold_281_28
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30308..30517)
DNA (210bp) protein (70aa)
Phosphoribosylamine--glycine ligase {ECO:0000256|HAMAP-Rule:MF_00138}; EC=6.3.4.13 {ECO:0000256|HAMAP-Rule:MF_00138};; GARS {ECO:0000256|HAMAP-Rule:MF_00138}; Glycinamide ribonucleotide synthetase {EC
phosphoribosylamine--glycine ligase
Displaying 28 items

View Taxonomy