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NECEvent2014_6_5_scaffold_298

Alias: 176_005_scaffold_298

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_298_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1..327
DNA (327bp) protein (109aa)
ssuB2; aliphatic sulfonates import ATP-binding protein SsuB (EC:3.6.3.-)
Uncharacterized protein {ECO:0000313|EMBL:EEH98700.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
NECEvent2014_6_5_scaffold_298_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

568..1455
DNA (888bp) protein (296aa)
metF; 5,10-methylenetetrahydrofolate reductase (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
NECEvent2014_6_5_scaffold_298_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1469..1924
DNA (456bp) protein (152aa)
luxS; S-ribosylhomocysteinase (EC:4.4.1.21)
S-ribosylhomocysteine lyase {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059609}; EC=4.4.1.21 {ECO:0000256|HAMAP-Rule:MF_00091, ECO:0000256|SAAS:SAAS00059628};; AI-2 synthesis protein {ECO
NECEvent2014_6_5_scaffold_298_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1914..2603
DNA (690bp) protein (230aa)
vitamin B12 dependent methionine synthase, activation region
Vitamin B12 dependent methionine synthase, activation region {ECO:0000313|EMBL:AGX44039.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
NECEvent2014_6_5_scaffold_298_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2557..4989
DNA (2433bp) protein (811aa)
B12 binding domain protein {ECO:0000313|EMBL:AIY80201.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
5-methyltetrahydrofolate--homocysteine methyltransferase
NECEvent2014_6_5_scaffold_298_6
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5053..5670)
DNA (618bp) protein (206aa)
ADP-ribose pyrophosphatase
ADP-ribose pyrophosphatase {ECO:0000313|EMBL:AGF58291.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacet
NECEvent2014_6_5_scaffold_298_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5847..6380
DNA (534bp) protein (178aa)
Putative membrane protein {ECO:0000313|EMBL:EES51034.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'Bo
hypothetical protein
NECEvent2014_6_5_scaffold_298_8
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6449..7309)
DNA (861bp) protein (287aa)
EDD domain protein, DegV family {ECO:0000313|EMBL:EEG73160.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
EDD domain protein, DegV family
NECEvent2014_6_5_scaffold_298_9
Clostridium ultunense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7419..8015
DNA (597bp) protein (199aa)
Transcriptional regulator, TetR family {ECO:0000313|EMBL:CCQ96649.1}; TaxID=1288971 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium ultunen
TetR family transcriptional regulator
NECEvent2014_6_5_scaffold_298_10
unknown

Not on your lists

8121..8249
DNA (129bp) protein (43aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_298_11
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8342..10624
DNA (2283bp) protein (761aa)
helD1; helicase IV (EC:3.6.4.12)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
NECEvent2014_6_5_scaffold_298_12
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10732..11907
DNA (1176bp) protein (392aa)
Metallo-beta-lactamase family protein/flavodoxin {ECO:0000313|EMBL:EOR24821.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
metallo-beta-lactamase/flavodoxin
NECEvent2014_6_5_scaffold_298_13
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12047..12289
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR25944.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_298_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12308..12703
DNA (396bp) protein (132aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84159.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_298_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13538..13726
DNA (189bp) protein (63aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL07653.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_5_scaffold_298_16
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13740..14651
DNA (912bp) protein (304aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SA
hprK; HPr(Ser) kinase/phosphatase
NECEvent2014_6_5_scaffold_298_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14732..16117
DNA (1386bp) protein (462aa)
M18 family aminopeptidase {ECO:0000256|RuleBase:RU004387}; EC=3.4.11.- {ECO:0000256|RuleBase:RU004387};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
putative M18 family aminopeptidase 1
NECEvent2014_6_5_scaffold_298_18
Eubacterium sp. CAG:581, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16539..18065
DNA (1527bp) protein (509aa)
Uncharacterized protein {ECO:0000313|EMBL:CDF12524.1}; TaxID=1262890 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium
hypothetical protein
NECEvent2014_6_5_scaffold_298_19
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18069..18785
DNA (717bp) protein (239aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB76067.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_5_scaffold_298_20
Paenibacillus odorifer, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

18807..19685
DNA (879bp) protein (293aa)
cobalt transporter
Cobalt transporter {ECO:0000313|EMBL:AIQ72473.1}; TaxID=189426 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus odorifer.;"
NECEvent2014_6_5_scaffold_298_21
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19625..21316
DNA (1692bp) protein (564aa)
ABC transporter related protein {ECO:0000313|EMBL:ETI92504.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter
cbiO5; cobalt ABC transport system ATP-binding protein CbiO5
NECEvent2014_6_5_scaffold_298_22
Paenibacillus sp. FSL H8-237, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

21295..22032
DNA (738bp) protein (246aa)
membrane protein
Uncharacterized protein {ECO:0000313|EMBL:ETT53986.1}; TaxID=1227350 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H8-237.;"
NECEvent2014_6_5_scaffold_298_23
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22104..22349
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK29962.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
bacteriophage holin family protein
NECEvent2014_6_5_scaffold_298_24
Turicibacter sanguinis, Turicibacter, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22509..24137)
DNA (1629bp) protein (543aa)
Aspartate 4-decarboxylase {ECO:0000313|EMBL:EFF63463.1}; EC=4.1.1.12 {ECO:0000313|EMBL:EFF63463.1};; TaxID=702450 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichace
aspartate 4-decarboxylase
NECEvent2014_6_5_scaffold_298_25
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24318..25154)
DNA (837bp) protein (279aa)
PHP domain protein {ECO:0000313|EMBL:ACD23406.1}; EC=3.1.3.- {ECO:0000313|EMBL:ACD23406.1};; Uncharacterized protein {ECO:0000313|EMBL:CDH91748.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostrid
metal-dependent phosphoesterase
NECEvent2014_6_5_scaffold_298_26
Clostridium sp. FS41, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25558..27132)
DNA (1575bp) protein (525aa)
Uncharacterized protein {ECO:0000313|EMBL:KJJ71046.1}; TaxID=1609975 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. FS41.;"
hypothetical protein
NECEvent2014_6_5_scaffold_298_27
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

27321..28154
DNA (834bp) protein (278aa)
Uncharacterized protein {ECO:0000313|EMBL:KEO77475.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polymy
hydrogenase
NECEvent2014_6_5_scaffold_298_28
Paenibacillus polymyxa, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

28144..29325
DNA (1182bp) protein (394aa)
Cystathionine beta-lyase {ECO:0000313|EMBL:KEO77476.1}; TaxID=1406 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus polymyxa (Bacillus polym
cystathionine beta-lyase
NECEvent2014_6_5_scaffold_298_29
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29362..29472
DNA (111bp) protein (37aa)
glyoxylase
Glyoxylase {ECO:0000313|EMBL:ENZ04023.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Displaying 29 items

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