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NECEvent2014_6_5_scaffold_363

Alias: 176_005_scaffold_363

Search features with annotation key words

Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_363_1
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..631
DNA (630bp) protein (210aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF56378.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_5_scaffold_363_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(929..1546)
DNA (618bp) protein (206aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY83965.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_363_trna_1
unknown

Not on your lists

1662..1733
DNA (72bp)
transferRNA
NECEvent2014_6_5_scaffold_363_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1870..2757)
DNA (888bp) protein (296aa)
33 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00117, ECO:0000256|SAAS:SAAS00038673}; Heat shock protein 33 homolog {ECO:0000256|HAMAP-Rule:MF_00117}; TaxID=536233 species="Bacteria; Firmicutes; Clostri
hslO; Hsp33-like chaperonin
NECEvent2014_6_5_scaffold_363_4
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2759..3508)
DNA (750bp) protein (250aa)
putative methyltransferase (EC:2.1.1.-)
Putative methyltransferase {ECO:0000313|EMBL:AGX43718.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43718.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
NECEvent2014_6_5_scaffold_363_5
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3575..3826)
DNA (252bp) protein (84aa)
small acid-soluble spore protein alpha/beta family protein
Small, acid-soluble spore protein, alpha/beta family {ECO:0000313|EMBL:ABG87200.1}; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_6_5_scaffold_363_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4004..4993
DNA (990bp) protein (330aa)
Aspartate-semialdehyde dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121}; Short=ASA dehydrogenase {ECO:0000256|HAMAP-Rule:MF_02121};; Short=ASADH {ECO:0000256|HAMAP-Rule:MF_02121};; EC=1.2.1.11 {ECO:000
asd; aspartate-semialdehyde dehydrogenase (EC:1.2.1.11)
NECEvent2014_6_5_scaffold_363_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5010..5888
DNA (879bp) protein (293aa)
dapA; dihydrodipicolinate synthase (EC:4.2.1.52)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418, ECO:0000256|SAAS:SAAS00086421}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:M
NECEvent2014_6_5_scaffold_363_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5900..6655
DNA (756bp) protein (252aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
NECEvent2014_6_5_scaffold_363_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6792..6956
DNA (165bp) protein (55aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ01602.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_5_scaffold_363_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7068..7583)
DNA (516bp) protein (172aa)
Cob(I)yrinic acid a,c-diamide adenosyltransferase {ECO:0000313|EMBL:ENZ01908.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
ATP:corrinoid adenosyltransferase
NECEvent2014_6_5_scaffold_363_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7700..8410
DNA (711bp) protein (237aa)
dapD; 2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase (EC:2.3.1.89)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
NECEvent2014_6_5_scaffold_363_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8529..9236)
DNA (708bp) protein (236aa)
Single-stranded DNA binding protein {ECO:0000313|EMBL:CDH91404.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (
single-strand binding family protein
NECEvent2014_6_5_scaffold_363_13
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9293..10069)
DNA (777bp) protein (259aa)
polysaccharide deacetylase
Polysaccharide deacetylase {ECO:0000313|EMBL:AGX43728.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum D
NECEvent2014_6_5_scaffold_363_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10152..10685
DNA (534bp) protein (178aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71260.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_363_15
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10678..11559)
DNA (882bp) protein (294aa)
Putative=40-residue YVTN family beta-propeller repeat protein {ECO:0000313|EMBL:CDG01975.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
hypothetical protein
NECEvent2014_6_5_scaffold_363_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11714..11962
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97588.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_363_17
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12014..13921)
DNA (1908bp) protein (636aa)
HIRAN domain-containing protein {ECO:0000313|EMBL:EHJ00208.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_6_5_scaffold_363_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13925..15232)
DNA (1308bp) protein (436aa)
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
Protein FolC {ECO:0000313|EMBL:EKY24632.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_6_5_scaffold_363_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15377..17149)
DNA (1773bp) protein (591aa)
Oligoendopeptidase, pepF/M3 family protein {ECO:0000313|EMBL:AIY81706.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bot
oligoendopeptidase F
NECEvent2014_6_5_scaffold_363_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17297..18739)
DNA (1443bp) protein (481aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB14963.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
deoxyguanosinetriphosphate triphosphohydrolase-like protein
NECEvent2014_6_5_scaffold_363_21
Campylobacter showae, Campylobacter, Campylobacterales, Epsilonproteobacteria, Proteobacteria, Bacteria

Not on your lists

18866..19276
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:EKU11915.1}; TaxID=1244083 species="Bacteria; Proteobacteria; Epsilonproteobacteria; Campylobacterales; Campylobacteraceae; Campylobacter.;" source="Campyloba
hypothetical protein
NECEvent2014_6_5_scaffold_363_22
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19329..19811
DNA (483bp) protein (161aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB14868.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_5_scaffold_363_23
unknown

Not on your lists

19925..20059
DNA (135bp) protein (45aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_363_24
Prevotella sp. CAG:279, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20412..21662)
DNA (1251bp) protein (417aa)
Tat pathway signal sequence {ECO:0000313|EMBL:CDE40824.1}; TaxID=1262924 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prev
Tat (twin-arginine translocation) pathway signal sequence
NECEvent2014_6_5_scaffold_363_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22005..23195)
DNA (1191bp) protein (397aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99368.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ABC-2 type transporter family protein
NECEvent2014_6_5_scaffold_363_26
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23188..23919)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:ERK28435.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
ABC transporter family protein
NECEvent2014_6_5_scaffold_363_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24043..25314)
DNA (1272bp) protein (424aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99002.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
dicarboxylate symporter family protein
NECEvent2014_6_5_scaffold_363_28
Clostridium paraputrificum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25497..26597)
DNA (1101bp) protein (367aa)
Chitinase B {ECO:0000313|EMBL:BAA23796.1}; EC=3.2.1.14 {ECO:0000313|EMBL:BAA23796.1};; TaxID=29363 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
carbohydrate binding domain protein
Displaying 29 items

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