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NECEvent2014_6_5_scaffold_374

Alias: 176_005_scaffold_374

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_374_1
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..1677
DNA (1677bp) protein (559aa)
Magnesium-translocating P-type ATPase {ECO:0000313|EMBL:KIE48436.1}; EC=3.6.3.2 {ECO:0000313|EMBL:KIE48436.1};; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
mgtA; magnesium-transporting ATPase, P-type 1 (EC:3.6.3.2)
NECEvent2014_6_5_scaffold_374_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1853..3175
DNA (1323bp) protein (441aa)
Guanine permease {ECO:0000313|EMBL:KHD14323.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
xanthine/uracil permease family protein
NECEvent2014_6_5_scaffold_374_3
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3381..4643
DNA (1263bp) protein (421aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97368.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ycaM; inner membrane transporter ycaM
NECEvent2014_6_5_scaffold_374_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4749..5021
DNA (273bp) protein (91aa)
Hypothetical Uncharacterized protein {ECO:0000313|EMBL:CDG02155.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
hypothetical protein
NECEvent2014_6_5_scaffold_374_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5095..5970
DNA (876bp) protein (292aa)
LysR family transcriptional regulator
LysR-family transcriptional regulator {ECO:0000313|EMBL:ACD23282.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_6_5_scaffold_374_6
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6082..7056
DNA (975bp) protein (325aa)
Putative C4-dicarboxylate transporter/malic acid transport protein {ECO:0000313|EMBL:CDG01803.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
voltage-dependent anion channel family protein
NECEvent2014_6_5_scaffold_374_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7233..8432
DNA (1200bp) protein (400aa)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
isocitrate dehydrogenase
NECEvent2014_6_5_scaffold_374_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9523..9834
DNA (312bp) protein (104aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU72712.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_374_9
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9859..10167
DNA (309bp) protein (103aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ03410.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NECEvent2014_6_5_scaffold_374_10
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10367..11722
DNA (1356bp) protein (452aa)
PTS system, lactose/cellobiose IIC component family protein (EC:2.7.1.69)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NECEvent2014_6_5_scaffold_374_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11832..12536
DNA (705bp) protein (235aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY85117.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_374_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12654..13571
DNA (918bp) protein (306aa)
Glutaminase {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476}; EC=3.5.1.2 {ECO:0000256|HAMAP-Rule:MF_00313, ECO:0000256|SAAS:SAAS00041476};; TaxID=457396 species="Bacteria; Firmicutes;
glsA; glutaminase A (EC:3.5.1.2)
NECEvent2014_6_5_scaffold_374_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13713..16319
DNA (2607bp) protein (869aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
polA; DNA polymerase I (EC:2.7.7.7)
NECEvent2014_6_5_scaffold_374_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16333..16929
DNA (597bp) protein (199aa)
Dephospho-CoA kinase {ECO:0000256|HAMAP-Rule:MF_00376}; EC=2.7.1.24 {ECO:0000256|HAMAP-Rule:MF_00376};; Dephosphocoenzyme A kinase {ECO:0000256|HAMAP-Rule:MF_00376}; TaxID=457396 species="Bacteria; Fi
coaE; dephospho-CoA kinase (EC:2.7.1.24)
NECEvent2014_6_5_scaffold_374_15
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16946..17488
DNA (543bp) protein (181aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ03417.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
transglycosylase SLT domain protein
NECEvent2014_6_5_scaffold_374_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17506..18627
DNA (1122bp) protein (374aa)
glycosyl hydrolase family protein
Glycosyl hydrolase family 8 {ECO:0000313|EMBL:KIL06852.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_5_scaffold_374_17
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18821..20971
DNA (2151bp) protein (717aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU72720.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
hypothetical protein
NECEvent2014_6_5_scaffold_374_18
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21033..21953
DNA (921bp) protein (307aa)
Putative Hydrolase, alpha/beta fold family {ECO:0000313|EMBL:CDG02138.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cha
PGAP1-like family protein
NECEvent2014_6_5_scaffold_374_19
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22159..24069
DNA (1911bp) protein (637aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
his Kinase A domain protein
NECEvent2014_6_5_scaffold_374_20
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24074..26095
DNA (2022bp) protein (674aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
his Kinase A domain protein
NECEvent2014_6_5_scaffold_374_21
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26157..26663
DNA (507bp) protein (169aa)
Putative TspO/MBR family protein {ECO:0000313|EMBL:CDG02134.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF43
TspO/MBR family protein
NECEvent2014_6_5_scaffold_374_22
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26919..27773
DNA (855bp) protein (285aa)
transcription antiterminator LicT
Transcriptional antiterminator {ECO:0000313|EMBL:CDH92317.1}; Transcriptional antiterminator, BglG family {ECO:0000313|EMBL:ACD22356.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostri
NECEvent2014_6_5_scaffold_374_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27858..28613
DNA (756bp) protein (252aa)
DNA topoisomerase
DNA topoisomerase family protein {ECO:0000313|EMBL:AIY80495.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202
Displaying 23 items

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