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NECEvent2014_6_5_scaffold_414

Alias: 176_005_scaffold_414

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_414_1
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3..488)
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR26571.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_414_2
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

601..1662
DNA (1062bp) protein (354aa)
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:AJG96733.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostridi
NECEvent2014_6_5_scaffold_414_3
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1727..2644
DNA (918bp) protein (306aa)
Radical SAM superfamily protein {ECO:0000313|EMBL:AIY79761.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F
radical SAM protein
NECEvent2014_6_5_scaffold_414_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2812..4188)
DNA (1377bp) protein (459aa)
Spore cortex-lytic enzyme pre-pro-form {ECO:0000313|EMBL:ETI91770.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
spore cortex-lytic protein
NECEvent2014_6_5_scaffold_414_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4252..7815)
DNA (3564bp) protein (1188aa)
Putative Subtilisin like protease {ECO:0000313|EMBL:CDG02756.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4
subtilisin like protease
NECEvent2014_6_5_scaffold_414_6
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7960..8649)
DNA (690bp) protein (230aa)
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDB73911.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clo
helix-turn-helix domain protein
NECEvent2014_6_5_scaffold_414_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8671..9192)
DNA (522bp) protein (174aa)
peptidyl-prolyl cis-trans isomerase (EC:5.2.1.8)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU000493}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU000493};; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
NECEvent2014_6_5_scaffold_414_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9392..9664)
DNA (273bp) protein (91aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKY29790.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
NECEvent2014_6_5_scaffold_414_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9831..10589)
DNA (759bp) protein (253aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1351755 species="Bacteria; Firm
murI; glutamate racemase (EC:5.1.1.3)
NECEvent2014_6_5_scaffold_414_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10849..12750
DNA (1902bp) protein (634aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EKY29591.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
glutamine synthetase
NECEvent2014_6_5_scaffold_414_11
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12870..13979
DNA (1110bp) protein (370aa)
rpfG1; cyclic di-GMP phosphodiesterase response regulator RpfG (EC:3.1.4.52)
Cyclic di-GMP phosphodiesterase response regulator RpfG {ECO:0000313|EMBL:AGX41120.1}; EC=3.1.4.52 {ECO:0000313|EMBL:AGX41120.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiale
NECEvent2014_6_5_scaffold_414_12
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14031..14297)
DNA (267bp) protein (89aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ00449.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_5_scaffold_414_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14435..17638)
DNA (3204bp) protein (1068aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
carB; carbamoyl-phosphate synthase, large subunit (EC:6.3.5.5)
NECEvent2014_6_5_scaffold_414_14
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17651..18700)
DNA (1050bp) protein (350aa)
Carbamoyl-phosphate synthase small chain {ECO:0000256|HAMAP-Rule:MF_01209}; EC=6.3.5.5 {ECO:0000256|HAMAP-Rule:MF_01209};; Carbamoyl-phosphate synthetase glutamine chain {ECO:0000256|HAMAP-Rule:MF_012
carA; carbamoyl phosphate synthase small subunit (EC:6.3.5.5)
NECEvent2014_6_5_scaffold_414_15
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19101..19829
DNA (729bp) protein (243aa)
Putative phosphoesterase {ECO:0000313|EMBL:CDB74451.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridiu
hydrolase
NECEvent2014_6_5_scaffold_414_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19883..21337)
DNA (1455bp) protein (485aa)
methyl-accepting chemotaxis protein
Putative methyl-accepting chemotaxis protein {ECO:0000313|EMBL:EES48921.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bo
NECEvent2014_6_5_scaffold_414_17
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21403..21924)
DNA (522bp) protein (174aa)
putative membrane protein
Putative membrane protein {ECO:0000313|EMBL:CDM67527.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_5_scaffold_414_18
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21982..22788)
DNA (807bp) protein (269aa)
HAD hydrolase, IIB family protein
HAD hydrolase, IIB family protein {ECO:0000313|EMBL:AIY84024.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str.
NECEvent2014_6_5_scaffold_414_19
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22802..23578)
DNA (777bp) protein (259aa)
sDR; short-chain dehydrogenase/reductase SDR
Short-chain dehydrogenase/reductase SDR {ECO:0000313|EMBL:EHI97003.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-
Displaying 19 items

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