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NECEvent2014_6_5_scaffold_477

Alias: 176_005_scaffold_477

Search features with annotation key words

Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_477_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(77..571)
DNA (495bp) protein (165aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ03111.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
NUDIX family hydrolase
NECEvent2014_6_5_scaffold_477_2
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(625..1317)
DNA (693bp) protein (231aa)
Sugar fermentation stimulation protein homolog {ECO:0000256|HAMAP-Rule:MF_00095}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
sfsA; sugar fermentation stimulation protein A
NECEvent2014_6_5_scaffold_477_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1744..2067
DNA (324bp) protein (108aa)
transcriptional regulator PadR-like family protein
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:AIY83709.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
NECEvent2014_6_5_scaffold_477_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2060..2746
DNA (687bp) protein (229aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84632.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_477_5
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2746..3678
DNA (933bp) protein (311aa)
Uncharacterized protein {ECO:0000313|EMBL:ETD69995.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-59
hypothetical protein
NECEvent2014_6_5_scaffold_477_6
unknown

Not on your lists

comp(3710..4129)
DNA (420bp) protein (140aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_477_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4227..4910)
DNA (684bp) protein (228aa)
N-acetylmuramoyl-L-alanine amidase family protein
N-acetylmuramoyl-L-alanine amidase family protein {ECO:0000313|EMBL:AIY84659.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostrid
NECEvent2014_6_5_scaffold_477_8
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4953..5399)
DNA (447bp) protein (149aa)
Peptide methionine sulfoxide reductase MsrB {ECO:0000256|HAMAP-Rule:MF_01400}; EC=1.8.4.12 {ECO:0000256|HAMAP-Rule:MF_01400};; Peptide-methionine (R)-S-oxide reductase {ECO:0000256|HAMAP-Rule:MF_01400
methionine sulfoxide reductase B
NECEvent2014_6_5_scaffold_477_9
GWF2_Clostridiales_36_10_curated, Clostridiales, Bacteria

Not on your lists

5489..7021
DNA (1533bp) protein (511aa)
apolipoprotein N-acyltransferase; K03820 apolipoprotein N-acyltransferase [EC:2.3.1.-] Tax=GWF2_Clostridiales_36_10_curated
apolipoprotein N-acyltransferase
NECEvent2014_6_5_scaffold_477_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7059..7964)
DNA (906bp) protein (302aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96649.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
putative ATPase, BadF/BadG/BcrA/BcrD type
NECEvent2014_6_5_scaffold_477_11
Caldanaerobacter subterraneus, Caldanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7976..9127)
DNA (1152bp) protein (384aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AAM23515.1}; TaxID=273068 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Caldanaerobacter.;" source="Caldanaeroba
NECEvent2014_6_5_scaffold_477_12
Vagococcus lutrae, Vagococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(9186..10493)
DNA (1308bp) protein (436aa)
PTS system lactose/cellobiose family transporter subunit IIC (EC:2.7.1.69)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1408226 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Vagococcus.;" source="Vagococcus lutrae LBD1.;"
NECEvent2014_6_5_scaffold_477_13
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(10508..10819)
DNA (312bp) protein (104aa)
Uncharacterized protein {ECO:0000313|EMBL:EJS70129.1}; TaxID=1053179 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus BAG2X1-
hypothetical protein
NECEvent2014_6_5_scaffold_477_14
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10839..11108)
DNA (270bp) protein (90aa)
acyP; acylphosphatase AcyP (EC:3.6.1.7)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
NECEvent2014_6_5_scaffold_477_15
Carnobacterium sp. 17-4, Carnobacterium, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11126..11449)
DNA (324bp) protein (108aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AEB30166.1}; TaxID=208596 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium.;" source="Carnobacterium sp. (strain 17-
NECEvent2014_6_5_scaffold_477_16
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11442..11771)
DNA (330bp) protein (110aa)
phosphotransferase system PTS, lactose/cellobiose-specific IIA subunit
PTS mannose transporter subunit IIA {ECO:0000313|EMBL:ETD67912.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurian
NECEvent2014_6_5_scaffold_477_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11785..13101)
DNA (1317bp) protein (439aa)
6-phospho-beta-glucosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase {ECO:0000313|EMBL:ETI88380.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_6_5_scaffold_477_18
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13119..14030)
DNA (912bp) protein (304aa)
N-acetylmuramic acid 6-phosphate etherase {ECO:0000256|HAMAP-Rule:MF_00068, ECO:0000256|SAAS:SAAS00085795}; Short=MurNAc-6-P etherase {ECO:0000256|HAMAP-Rule:MF_00068};; EC=4.2.1.126 {ECO:0000256|HAMA
murQ; N-acetylmuramic acid 6-phosphate etherase
NECEvent2014_6_5_scaffold_477_19
[Clostridium] termitidis, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14290..16653)
DNA (2364bp) protein (788aa)
Uncharacterized protein {ECO:0000313|EMBL:EMS71631.1}; TaxID=1195236 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] termitidis CT
hypothetical protein
NECEvent2014_6_5_scaffold_477_20
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16877..17710)
DNA (834bp) protein (278aa)
SIS domain protein {ECO:0000313|EMBL:EKY28622.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
RpiR family phosphosugar-binding transcriptional regulator
NECEvent2014_6_5_scaffold_477_21
Acetohalobium arabaticum, Acetohalobium, Halanaerobiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17781..18956)
DNA (1176bp) protein (392aa)
sodium/proton antiporter
Sodium/proton antiporter, CPA1 family (TC 2.A.36) {ECO:0000313|EMBL:ADL12409.1}; TaxID=574087 species="Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halobacteroidaceae; Acetohalobium.;" source="A
NECEvent2014_6_5_scaffold_477_22
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19114..20016)
DNA (903bp) protein (301aa)
Cation efflux family protein {ECO:0000313|EMBL:CDB16964.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostr
cation efflux family protein
NECEvent2014_6_5_scaffold_477_23
Clostridium tyrobutyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20201..20851)
DNA (651bp) protein (217aa)
Uncharacterized protein {ECO:0000313|EMBL:CDL91138.1}; TaxID=1408889 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tyrobutyricum DIVETGP.
hypothetical protein
Displaying 23 items

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