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NECEvent2014_6_5_scaffold_538

Alias: 176_005_scaffold_538

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_538_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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94..1695
DNA (1602bp) protein (534aa)
Na/Pi-cotransporter family protein/PhoU family protein
Sodium-dependent phosphate transporter {ECO:0000313|EMBL:KIL08577.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.
NECEvent2014_6_5_scaffold_538_2
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1796..2446
DNA (651bp) protein (217aa)
cwlD; N-acetylmuramoyl-L-alanine amidase CwlD (EC:3.5.1.28)
N-acetylmuramoyl-L-alanine amidase CwlD {ECO:0000313|EMBL:EKQ52170.1}; Flags: Precursor;; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
NECEvent2014_6_5_scaffold_538_3
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2587..3429
DNA (843bp) protein (281aa)
putative fumarate hydratase subunit alpha (EC:4.2.1.2)
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily {ECO:0000313|EMBL:EKQ52172.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
NECEvent2014_6_5_scaffold_538_4
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3439..4002
DNA (564bp) protein (188aa)
fumarate hydratase
Hydro-lyase, Fe-S type, tartrate/fumarate subfamily, beta subunit {ECO:0000313|EMBL:ABR32380.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_6_5_scaffold_538_5
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4019..4876)
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ00734.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_5_scaffold_538_6
unknown

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5005..5169
DNA (165bp) protein (55aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_538_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5256..5945
DNA (690bp) protein (230aa)
Two component transcriptional regulator, winged helix family {ECO:0000313|EMBL:ETI91707.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
two component transcriptional regulator
NECEvent2014_6_5_scaffold_538_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5968..7740
DNA (1773bp) protein (591aa)
his Kinase A domain protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71480.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_538_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7928..10198
DNA (2271bp) protein (757aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
ribonucleoside-diphosphate reductase, alpha subunit (EC:1.17.4.1)
NECEvent2014_6_5_scaffold_538_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10220..11254
DNA (1035bp) protein (345aa)
nrdB; ribonucleoside-diphosphate reductase subunit beta (EC:1.17.4.1)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Cl
NECEvent2014_6_5_scaffold_538_11
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11491..13110
DNA (1620bp) protein (540aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000256|PIRNR:PIRNR000732}; EC=2.7.3.9 {ECO:0000256|PIRNR:PIRNR000732};; Phosphotransferase system, enzyme I {ECO:0000256|PIRNR:PIRNR000732}; TaxID=
ptsP; phosphoenolpyruvate-protein phosphotransferase (EC:2.7.3.9)
NECEvent2014_6_5_scaffold_538_12
unknown

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13128..13235
DNA (108bp) protein (36aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_538_13
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13360..13896
DNA (537bp) protein (179aa)
chrA; chromate transport protein
Chromate transporter family protein {ECO:0000313|EMBL:AIY79358.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum
NECEvent2014_6_5_scaffold_538_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13893..14426
DNA (534bp) protein (178aa)
Chromate transporter {ECO:0000313|EMBL:KJU71474.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
chromate transporter family protein
NECEvent2014_6_5_scaffold_538_15
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14427..15656
DNA (1230bp) protein (410aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL08591.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_5_scaffold_538_16
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15672..16844
DNA (1173bp) protein (391aa)
iadA; isoaspartyl dipeptidase IadA (EC:3.4.19.-)
Isoaspartyl dipeptidase {ECO:0000256|PIRNR:PIRNR001238}; EC=3.4.19.- {ECO:0000256|PIRNR:PIRNR001238};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
NECEvent2014_6_5_scaffold_538_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16871..17440)
DNA (570bp) protein (190aa)
Spore-cortex-lytic enzyme, sleb {ECO:0000313|EMBL:EES50540.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 st
spore-cortex-lytic enzyme, sleb
NECEvent2014_6_5_scaffold_538_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17503..18366)
DNA (864bp) protein (288aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41304.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_5_scaffold_538_19
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18541..19395
DNA (855bp) protein (285aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG03050.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
disA bacterial checkpoint controller nucleotide-binding family protein
NECEvent2014_6_5_scaffold_538_20
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19365..20585
DNA (1221bp) protein (407aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGF54055.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
Displaying 20 items

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