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NECEvent2014_6_5_scaffold_548

Alias: 176_005_scaffold_548

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_548_1
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3..1082)
DNA (1080bp) protein (360aa)
Branched-chain amino acid transporter {ECO:0000313|EMBL:KHS57004.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrispo
brnQ; branched-chain amino acid transport system II carrier protein
NECEvent2014_6_5_scaffold_548_2
unknown

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comp(1430..1738)
DNA (309bp) protein (103aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_548_3
unknown

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1996..2229
DNA (234bp) protein (78aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_548_4
unknown

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2368..2745
DNA (378bp) protein (126aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_548_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2895..4676)
DNA (1782bp) protein (594aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU000675}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU000675};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
glycosyl hydrolase family protein (EC:3.2.1.23)
NECEvent2014_6_5_scaffold_548_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4676..6028)
DNA (1353bp) protein (451aa)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sugar phosphotransferase system (PTS), IIC component
NECEvent2014_6_5_scaffold_548_7
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6389..6502)
DNA (114bp) protein (38aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR34076.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain AT
NECEvent2014_6_5_scaffold_548_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6700..7518)
DNA (819bp) protein (273aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97841.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_548_9
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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7727..8794
DNA (1068bp) protein (356aa)
AraC family transcriptional regulator (EC:3.2.1.37)
Uncharacterized protein {ECO:0000313|EMBL:CDC85506.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipel
NECEvent2014_6_5_scaffold_548_10
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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8951..10897
DNA (1947bp) protein (649aa)
NADH oxidase {ECO:0000313|EMBL:KGJ51147.1}; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.
NADH:flavin oxidoreductases, Old Yellow Enzyme family
NECEvent2014_6_5_scaffold_548_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10983..11312)
DNA (330bp) protein (110aa)
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:EHJ32507.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclo
ArsR family transcriptional regulator
NECEvent2014_6_5_scaffold_548_12
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11328..12104)
DNA (777bp) protein (259aa)
Nitroreductase {ECO:0000313|EMBL:CEQ30523.1}; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Clostridium sordellii.;"
4fe-4s binding domain protein
NECEvent2014_6_5_scaffold_548_13
[Clostridium] hylemonae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12273..13019
DNA (747bp) protein (249aa)
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEG75885.1}; TaxID=553973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] hylemonae DSM 15053.;"
putative polyferredoxin
NECEvent2014_6_5_scaffold_548_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13071..14519)
DNA (1449bp) protein (483aa)
TrkH family potassium uptake protein {ECO:0000313|EMBL:EEH97164.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43
trkH; Trk system potassium uptake protein TrkH
NECEvent2014_6_5_scaffold_548_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14525..15880)
DNA (1356bp) protein (452aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH97163.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
trkA; potassium transporter peripheral membrane component
NECEvent2014_6_5_scaffold_548_16
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16418..18091
DNA (1674bp) protein (558aa)
GH3 auxin-responsive promoter {ECO:0000313|EMBL:EKY27534.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.
plant auxin-responsive GH3-like protein
Displaying 16 items

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