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NECEvent2014_6_5_scaffold_570

Alias: 176_005_scaffold_570

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_570_1
unknown

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comp(72..1868)
DNA (1797bp) protein (599aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_570_2
Caldicellulosiruptor kronotskyensis, Caldicellulosiruptor, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

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comp(1896..5687)
DNA (3792bp) protein (1264aa)
von willebrand factor type a
von Willebrand factor type A {ECO:0000313|EMBL:ADQ46197.1}; TaxID=632348 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacterales Family III. Incertae Sedis; Caldicell
NECEvent2014_6_5_scaffold_570_3
unknown

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comp(5895..6014)
DNA (120bp) protein (40aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_570_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6036..6764)
DNA (729bp) protein (243aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY85132.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_570_5
Roseburia intestinalis, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7385..8107
DNA (723bp) protein (241aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL08636.1}; TaxID=657315 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia intestinalis M50/1.;"
NECEvent2014_6_5_scaffold_570_6
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8368..9387)
DNA (1020bp) protein (340aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
hypothetical protein
NECEvent2014_6_5_scaffold_570_7
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9392..10063)
DNA (672bp) protein (224aa)
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CDM67570.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_5_scaffold_570_8
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10132..12639)
DNA (2508bp) protein (836aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM67569.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_5_scaffold_570_9
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12639..13316)
DNA (678bp) protein (226aa)
ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDM67568.1}; EC=3.6.3.- {ECO:0000313|EMBL:CDM67568.1};; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
NECEvent2014_6_5_scaffold_570_10
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(13610..13918)
DNA (309bp) protein (103aa)
hypothetical protein
Putative transcriptional regulator {ECO:0000313|EMBL:EOR25036.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoform
NECEvent2014_6_5_scaffold_570_11
Blautia sp. CAG:257, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14460..15191)
DNA (732bp) protein (244aa)
Uncharacterized protein {ECO:0000313|EMBL:CDA06089.1}; TaxID=1262756 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CA
hypothetical protein
NECEvent2014_6_5_scaffold_570_12

Not on your lists

comp(15681..16103)
DNA (423bp) protein (141aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ35939.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
DNA-binding domain-containing protein
NECEvent2014_6_5_scaffold_570_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(16192..17079)
DNA (888bp) protein (296aa)
PHP domain protein {ECO:0000313|EMBL:EKY28415.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
putative metal-dependent phosphoesterase
Displaying 13 items

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