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NECEvent2014_6_5_scaffold_601

Alias: 176_005_scaffold_601

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_601_1
unknown

Not on your lists

comp(3..98)
DNA (96bp) protein (32aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_601_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(110..523)
DNA (414bp) protein (138aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU70767.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_601_3
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

753..986
DNA (234bp) protein (78aa)
Hydrogenase assembly chaperone HypC/HupF {ECO:0000313|EMBL:ERI91274.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 str. F0
hydrogenase assembly chaperone hypC/hupF
NECEvent2014_6_5_scaffold_601_4
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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983..2053
DNA (1071bp) protein (357aa)
Hydrogenase isoenzymes formation protein HypD {ECO:0000313|EMBL:KAJ53358.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypD; hypD hydrogenase expression/formation protein HypD
NECEvent2014_6_5_scaffold_601_5
Clostridiales bacterium oral taxon 876, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2068..3069
DNA (1002bp) protein (334aa)
Hydrogenase expression/formation protein HypE {ECO:0000313|EMBL:ERI91276.1}; TaxID=1321778 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="Clostridiales bacterium oral taxon 876 st
hydrogenase expression/formation protein HypE
NECEvent2014_6_5_scaffold_601_6
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3086..3466
DNA (381bp) protein (127aa)
NADH dehydrogenase (Ubiquinone) {ECO:0000313|EMBL:KAJ53360.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum
NECEvent2014_6_5_scaffold_601_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3481..4563
DNA (1083bp) protein (361aa)
Respiratory-chain NADH dehydrogenase, subunit {ECO:0000313|EMBL:EKY29392.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
NiFe-hydrogenase III large subunit
NECEvent2014_6_5_scaffold_601_8
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4564..4905
DNA (342bp) protein (114aa)
Probable hydrogenase nickel incorporation protein HypA {ECO:0000256|HAMAP-Rule:MF_00213}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
hypA; hydrogenase nickel insertion protein HypA
NECEvent2014_6_5_scaffold_601_9
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4907..5557
DNA (651bp) protein (217aa)
Hydrogenase accessory protein HypB {ECO:0000313|EMBL:EKY29394.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM
hydrogenase accessory protein HypB
NECEvent2014_6_5_scaffold_601_10
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5569..6099
DNA (531bp) protein (177aa)
Uncharacterized protein {ECO:0000313|EMBL:CDB74235.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium
hypothetical protein
NECEvent2014_6_5_scaffold_601_11
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6099..6362
DNA (264bp) protein (88aa)
Monovalent cation/H+ antiporter subunit F {ECO:0000313|EMBL:KAJ53365.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
monovalent cation/H+ antiporter subunit F
NECEvent2014_6_5_scaffold_601_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6359..6706
DNA (348bp) protein (116aa)
Monovalent cation/proton antiporter, MnhG/PhaG subunit {ECO:0000313|EMBL:EKY29397.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
Na(+)/H(+) antiporter subunit G
NECEvent2014_6_5_scaffold_601_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6699..6965
DNA (267bp) protein (89aa)
Monovalent cation/H+ antiporter subunit B domain protein {ECO:0000313|EMBL:EKY29398.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
membrane bound hydrogenase subunit MbhD
NECEvent2014_6_5_scaffold_601_14
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6962..7252
DNA (291bp) protein (97aa)
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
membrane bound hydrogenase subunit MbhE
NECEvent2014_6_5_scaffold_601_15
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7239..7706
DNA (468bp) protein (156aa)
Na+/H+ antiporter MnhB subunit-related protein {ECO:0000313|EMBL:KAJ53368.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
monovalent cation/H+ antiporter subunit B
NECEvent2014_6_5_scaffold_601_16
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7696..8040
DNA (345bp) protein (115aa)
Monovalent cation/H+ antiporter subunit C {ECO:0000313|EMBL:KAJ53369.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium teta
monovalent cation/H+ antiporter subunit C
NECEvent2014_6_5_scaffold_601_17
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8037..9980
DNA (1944bp) protein (648aa)
Hydrogenase-4 component B / Formate hydrogenlyase subunit 3 {ECO:0000313|EMBL:CDB74242.1}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environm
formate hydrogenlyase subunit 3/multisubunit Na+/H+ antiporter, MnhD subunit
NECEvent2014_6_5_scaffold_601_18
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9994..10974
DNA (981bp) protein (327aa)
Respiratory-chain NADH dehydrogenase subunit 1 {ECO:0000313|EMBL:KAJ53371.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
cooK; carbon monoxide-induced hydrogenase subunit CooK
NECEvent2014_6_5_scaffold_601_19
Clostridium tetanomorphum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10989..11426
DNA (438bp) protein (146aa)
ech2C; Ech-type complex subunit Ech2C (EC:1.12.7.2)
Hydrogenase-4 subunit I {ECO:0000313|EMBL:KAJ53372.1}; TaxID=1230342 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium tetanomorphum DSM 665.
NECEvent2014_6_5_scaffold_601_20
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11426..11884
DNA (459bp) protein (153aa)
4Fe-4S ferredoxin iron-sulfur binding domain protein {ECO:0000313|EMBL:CDB15575.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental s
NADH-plastoquinone oxidoreductase subunit
NECEvent2014_6_5_scaffold_601_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12234..12752
DNA (519bp) protein (173aa)
GnaT-family acetyltransferase
GnaT-family acetyltransferase {ECO:0000313|EMBL:ACD22038.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain
NECEvent2014_6_5_scaffold_601_22
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12749..12913)
DNA (165bp) protein (55aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX42546.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_5_scaffold_601_23
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13110..14060
DNA (951bp) protein (317aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KIL09075.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_5_scaffold_601_24
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14070..15116
DNA (1047bp) protein (349aa)
dinB; DNA polymerase IV (EC:2.7.7.7)
DNA polymerase IV {ECO:0000256|HAMAP-Rule:MF_01113}; Short=Pol IV {ECO:0000256|HAMAP-Rule:MF_01113};; EC=2.7.7.7 {ECO:0000256|HAMAP-Rule:MF_01113};; TaxID=1345695 species="Bacteria; Firmicutes; Clostr
NECEvent2014_6_5_scaffold_601_25
Cellulosilyticum lentocellum, Cellulosilyticum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15474..16640
DNA (1167bp) protein (389aa)
tryptophan synthase subunit beta (EC:4.2.1.20)
Tryptophan synthase beta chain {ECO:0000256|HAMAP-Rule:MF_00133}; EC=4.2.1.20 {ECO:0000256|HAMAP-Rule:MF_00133};; TaxID=642492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae
Displaying 25 items

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