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NECEvent2014_6_5_scaffold_662

Alias: 176_005_scaffold_662

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_662_trna_1
unknown

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57..128
DNA (72bp)
transferRNA
NECEvent2014_6_5_scaffold_662_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(181..585)
DNA (405bp) protein (135aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71811.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_662_2
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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791..1474
DNA (684bp) protein (228aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR27993.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_662_trna_2
unknown

Not on your lists

1539..1611
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_662_3
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1689..2972
DNA (1284bp) protein (428aa)
Sodium:proton antiporter {ECO:0000313|EMBL:KJU71814.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
C4-dicarboxylate anaerobic carrier family protein
NECEvent2014_6_5_scaffold_662_4
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3008..3481)
DNA (474bp) protein (158aa)
ispF; 2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase (EC:4.6.1.12)
2-C-methyl-D-erythritol 2,4-cyclodiphosphate synthase {ECO:0000256|HAMAP-Rule:MF_00107, ECO:0000256|RuleBase:RU004395}; Short=MECDP-synthase {ECO:0000256|HAMAP-Rule:MF_00107};; Short=MECPP-synthase {E
NECEvent2014_6_5_scaffold_662_5
unknown

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comp(3523..3693)
DNA (171bp) protein (57aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_662_6
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3863..4894
DNA (1032bp) protein (344aa)
Uncharacterized protein {ECO:0000313|EMBL:KJU71816.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
anti-sigma factor family protein
NECEvent2014_6_5_scaffold_662_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4881..5642
DNA (762bp) protein (254aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU003887}; EC=5.4.99.- {ECO:0000256|RuleBase:RU003887};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridiu
pseudouridine synthase family protein
NECEvent2014_6_5_scaffold_662_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5739..6629)
DNA (891bp) protein (297aa)
yxkH1; putative polysaccharide deacetylase YxkH (EC:3.-.-.-)
Putative polysaccharide deacetylase YxkH {ECO:0000313|EMBL:AGX41381.1}; EC=3.-.-.- {ECO:0000313|EMBL:AGX41381.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
NECEvent2014_6_5_scaffold_662_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6836..7582
DNA (747bp) protein (249aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH96551.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_662_10
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7603..8979
DNA (1377bp) protein (459aa)
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
acyl-CoA reductase family protein
NECEvent2014_6_5_scaffold_662_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8995..9852
DNA (858bp) protein (286aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ00660.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
Transcriptional regulators of NagC/XylR family
NECEvent2014_6_5_scaffold_662_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9961..15162
DNA (5202bp) protein (1734aa)
Putative Cyclic beta 1-2 glucan synthetase {ECO:0000313|EMBL:CDG00763.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium cha
protein NdvB
Displaying 14 items

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