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NECEvent2014_6_5_scaffold_741

Alias: 176_005_scaffold_741

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_741_1
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..1311)
DNA (1311bp) protein (437aa)
Putative Sodium:alanine symporter family protein {ECO:0000313|EMBL:CDG01366.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
amino acid ABC transporter
NECEvent2014_6_5_scaffold_741_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1691..3343)
DNA (1653bp) protein (551aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_00572, ECO:0000256|SAAS:SAAS00085054};; Alpha-IPM synthase {ECO:0000
leuA3; 2-isopropylmalate synthase LeuA (EC:2.3.3.13)
NECEvent2014_6_5_scaffold_741_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3864..4652
DNA (789bp) protein (263aa)
Cof-like hydrolase {ECO:0000313|EMBL:ENZ35146.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HAD hydrolase
NECEvent2014_6_5_scaffold_741_4
Clostridium bornimense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4677..5633)
DNA (957bp) protein (319aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDM70093.1}; TaxID=1216932 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bornimense.;"
NECEvent2014_6_5_scaffold_741_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5743..6600
DNA (858bp) protein (286aa)
methyltransferase small domain protein
Methyltransferase small domain protein {ECO:0000313|EMBL:AIY82481.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii
NECEvent2014_6_5_scaffold_741_6
unknown

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comp(6745..7101)
DNA (357bp) protein (119aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_741_7
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7277..7489)
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:KIN79885.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
hypothetical protein
NECEvent2014_6_5_scaffold_741_8
Roseburia sp. CAG:303, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7828..8184
DNA (357bp) protein (119aa)
Uncharacterized protein {ECO:0000313|EMBL:CDE53820.1}; TaxID=1262944 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp
NECEvent2014_6_5_scaffold_741_9
unknown

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comp(8273..8443)
DNA (171bp) protein (57aa)
hypothetical protein
NECEvent2014_6_5_scaffold_741_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8576..9370)
DNA (795bp) protein (265aa)
Putative GTP cyclohydrolase 1 type 2 {ECO:0000256|RuleBase:RU004385}; EC=3.5.4.16 {ECO:0000256|RuleBase:RU004385};; GTP cyclohydrolase I {ECO:0000256|RuleBase:RU004385}; TaxID=1415775 species="Bacteri
NIF3 family protein
NECEvent2014_6_5_scaffold_741_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9371..10066)
DNA (696bp) protein (232aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84531.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_741_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10155..11324)
DNA (1170bp) protein (390aa)
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
rpoD; RNA polymerase sigma factor rpoD
NECEvent2014_6_5_scaffold_741_13
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11272..13068)
DNA (1797bp) protein (599aa)
DNA primase {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811}; EC=2.7.7.- {ECO:0000256|HAMAP-Rule:MF_00974, ECO:0000256|PIRNR:PIRNR002811};; TaxID=1415775 species="Bacteria; Firmicutes;
dnaG; DNA primase
Displaying 13 items

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