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NECEvent2014_6_5_scaffold_789

Alias: 176_005_scaffold_789

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_789_1
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..106
DNA (105bp) protein (35aa)
Sugar ABC transporter substrate-binding protein {ECO:0000313|EMBL:ETA79886.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiiba
NECEvent2014_6_5_scaffold_789_2
Peptostreptococcaceae bacterium oral taxon 113, Clostridiales, Clostridia, Firmicutes, Bacteria

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170..655
DNA (486bp) protein (162aa)
Uncharacterized protein {ECO:0000313|EMBL:ERJ85214.1}; TaxID=1321784 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae.;" source="Peptostreptococcaceae bacterium oral tax
NECEvent2014_6_5_scaffold_789_3
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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671..2758
DNA (2088bp) protein (696aa)
Sugar ABC transporter permease {ECO:0000313|EMBL:ETA79888.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232
sugar ABC transporter permease
NECEvent2014_6_5_scaffold_789_4
Youngiibacter fragilis, Youngiibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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2761..3657
DNA (897bp) protein (299aa)
Sugar ABC transporter permease {ECO:0000313|EMBL:ETA79889.1}; TaxID=994573 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Youngiibacter.;" source="Youngiibacter fragilis 232
binding-protein-dependent transport system innermembrane protein
NECEvent2014_6_5_scaffold_789_5
Helcococcus kunzii, Helcococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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3670..4752
DNA (1083bp) protein (361aa)
Uncharacterized protein {ECO:0000313|EMBL:EHR34065.1}; TaxID=883114 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptoniphilaceae; Helcococcus.;" source="Helcococcus kunzii ATCC 51366.;"
ABC transporter ATP-binding protein
NECEvent2014_6_5_scaffold_789_6
[Clostridium] leptum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4784..5452)
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:EDO62747.1}; TaxID=428125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] leptum DSM 753
hypothetical protein
NECEvent2014_6_5_scaffold_789_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6032..7237
DNA (1206bp) protein (402aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02007, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:00002
tyrosyl-tRNA synthetase (EC:6.1.1.1)
NECEvent2014_6_5_scaffold_789_8
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7263..7772)
DNA (510bp) protein (170aa)
Copper/zinc superoxide dismutase {ECO:0000313|EMBL:EDQ96553.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter
sodC; copper/zinc superoxide dismutase
NECEvent2014_6_5_scaffold_789_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7868..8332
DNA (465bp) protein (155aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR20752.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
NECEvent2014_6_5_scaffold_789_10
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8335..8667
DNA (333bp) protein (111aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY25484.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
thioredoxin domain-containing protein
NECEvent2014_6_5_scaffold_789_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9009..10568
DNA (1560bp) protein (520aa)
Two component transcriptional regulator, arac family protein {ECO:0000313|EMBL:ERK32325.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
AraC; AraC family transcriptional regulator
NECEvent2014_6_5_scaffold_789_12
Lachnoclostridium phytofermentans, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10596..11666
DNA (1071bp) protein (357aa)
ArsR family transcriptional regulator
Transcriptional regulator, ArsR family {ECO:0000313|EMBL:ABX42989.1}; TaxID=357809 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium phytofermentans (str
NECEvent2014_6_5_scaffold_789_13
unknown

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11802..12185
DNA (384bp) protein (128aa)

This feature has no annotations

Displaying 13 items

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