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NECEvent2014_6_5_scaffold_797

Alias: 176_005_scaffold_797

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_797_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..637)
DNA (636bp) protein (212aa)
chemotaxis protein CheA (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
NECEvent2014_6_5_scaffold_797_2
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(651..1418)
DNA (768bp) protein (256aa)
cheR; CheR methyltransferase, SAM binding domain (EC:2.1.1.80)
Chemotaxis protein CheR {ECO:0000313|EMBL:KIL09005.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_5_scaffold_797_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1492..1980)
DNA (489bp) protein (163aa)
cheD; chemoreceptor glutamine deamidase CheD (EC:3.5.1.44)
Probable chemoreceptor glutamine deamidase CheD {ECO:0000256|HAMAP-Rule:MF_01440}; EC=3.5.1.44 {ECO:0000256|HAMAP-Rule:MF_01440};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiale
NECEvent2014_6_5_scaffold_797_4
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1989..2441)
DNA (453bp) protein (151aa)
cheW; chemotaxis protein chew
Chemotaxis protein chew {ECO:0000313|EMBL:AGF58346.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetoni
NECEvent2014_6_5_scaffold_797_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2451..4349)
DNA (1899bp) protein (633aa)
hypothetical protein
Serine phosphatase RsbU, regulator of sigma subunit {ECO:0000313|EMBL:KIL09002.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_6_5_scaffold_797_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4424..5227)
DNA (804bp) protein (268aa)
Aminotransferase, class IV {ECO:0000313|EMBL:AJH01366.1}; TaxID=1520 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (Clostrid
class IV aminotransferase
NECEvent2014_6_5_scaffold_797_7
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5242..5880)
DNA (639bp) protein (213aa)
HAD-superfamily subfamily IB hydrolase {ECO:0000313|EMBL:CDB14812.1}; TaxID=1262780 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" sour
HAD family hydrolase
NECEvent2014_6_5_scaffold_797_8
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5956..7149)
DNA (1194bp) protein (398aa)
aspartate aminotransferase (EC:2.6.1.1)
Aspartate aminotransferase {ECO:0000313|EMBL:KIL08999.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
NECEvent2014_6_5_scaffold_797_9
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7164..7988)
DNA (825bp) protein (275aa)
PHP domain-containing protein {ECO:0000313|EMBL:EOR20178.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU
PHP domain protein
NECEvent2014_6_5_scaffold_797_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8147..8446)
DNA (300bp) protein (100aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH98404.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_797_11
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8705..12031)
DNA (3327bp) protein (1109aa)
nifJ; pyruvate:ferredoxin (flavodoxin) oxidoreductase (EC:1.2.7.1)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
Displaying 11 items

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