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NECEvent2014_6_5_scaffold_858

Alias: 176_005_scaffold_858

Search features with annotation key words

Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_858_1
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..111)
DNA (111bp) protein (37aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ03624.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_5_scaffold_858_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(363..743)
DNA (381bp) protein (127aa)
mRNA interferase {ECO:0000256|PIRNR:PIRNR033490}; EC=3.1.-.- {ECO:0000256|PIRNR:PIRNR033490};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
endoribonuclease endoA (EC:3.1.-.-)
NECEvent2014_6_5_scaffold_858_3
unknown

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comp(725..955)
DNA (231bp) protein (77aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_858_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1078..1707)
DNA (630bp) protein (210aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH99516.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
NECEvent2014_6_5_scaffold_858_5
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1766..3268)
DNA (1503bp) protein (501aa)
yjeF-related family protein
YjeF-related family protein {ECO:0000313|EMBL:AIY83556.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sulli
NECEvent2014_6_5_scaffold_858_6
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3272..3649)
DNA (378bp) protein (126aa)
Holo-[acyl-carrier-protein] synthase {ECO:0000256|HAMAP-Rule:MF_00101, ECO:0000256|SAAS:SAAS00237208}; Short=Holo-ACP synthase {ECO:0000256|HAMAP-Rule:MF_00101};; EC=2.7.8.7 {ECO:0000256|HAMAP-Rule:MF
acpS; 4'-phosphopantetheinyl transferase
NECEvent2014_6_5_scaffold_858_7
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3680..4006)
DNA (327bp) protein (109aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84663.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_858_8
Clostridium sp. CAG:221, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4397..4807)
DNA (411bp) protein (137aa)
Single-stranded DNA-binding protein {ECO:0000256|HAMAP-Rule:MF_00984, ECO:0000256|PIRNR:PIRNR002070}; Short=SSB {ECO:0000256|HAMAP-Rule:MF_00984};; TaxID=1262780 species="Bacteria; Firmicutes; Clostri
ssb; single-stranded DNA-binding family protein
NECEvent2014_6_5_scaffold_858_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4951..5787)
DNA (837bp) protein (279aa)
Ribonuclease BN {ECO:0000313|EMBL:KJU72316.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
yihY; YihY family inner membrane domain protein
NECEvent2014_6_5_scaffold_858_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6053..6925
DNA (873bp) protein (291aa)
Galactose mutarotase {ECO:0000313|EMBL:KJU72317.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
aldose 1-epimerase family protein
NECEvent2014_6_5_scaffold_858_11
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6941..9235)
DNA (2295bp) protein (765aa)
ATP-dependent helicase {ECO:0000313|EMBL:KJU72318.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
DEAD_2 family protein
NECEvent2014_6_5_scaffold_858_12
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9433..10023)
DNA (591bp) protein (197aa)
Uncharacterized protein {ECO:0000313|EMBL:CDG00693.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
hypothetical protein
NECEvent2014_6_5_scaffold_858_13
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10511..10744
DNA (234bp) protein (78aa)
AbrB family transcriptional regulator
AbrB family transcriptional regulator {ECO:0000313|EMBL:ETD68392.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteuri
Displaying 13 items

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