ggKbase home page

NECEvent2014_6_5_scaffold_865

Alias: 176_005_scaffold_865

Search features with annotation key words

Displaying 16 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_865_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1..282)
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH98379.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
flagellar cap protein FliD
NECEvent2014_6_5_scaffold_865_2

Not on your lists

comp(300..683)
DNA (384bp) protein (128aa)
Flagellar protein FliS {ECO:0000313|EMBL:ETJ19571.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
fliS; flagellar assembly protein FliS
NECEvent2014_6_5_scaffold_865_3
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(693..980)
DNA (288bp) protein (96aa)
Uncharacterized protein {ECO:0000313|EMBL:EHJ01510.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
hypothetical protein
NECEvent2014_6_5_scaffold_865_4
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(984..1328)
DNA (345bp) protein (115aa)
Uncharacterized protein {ECO:0000313|EMBL:EOR20138.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
flaG family protein
NECEvent2014_6_5_scaffold_865_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1341..1556)
DNA (216bp) protein (72aa)
Hypothetical Carbon storage regulator homolog {ECO:0000313|EMBL:CDG01253.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
carbon storage regulator CsrA
NECEvent2014_6_5_scaffold_865_6
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1561..1938)
DNA (378bp) protein (126aa)
Flagellar assembly factor FliW {ECO:0000256|HAMAP-Rule:MF_01185}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.
flagellar assembly protein FliW
NECEvent2014_6_5_scaffold_865_7
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1954..2946)
DNA (993bp) protein (331aa)
Flagellar hook-associated protein 3 {ECO:0000313|EMBL:ERK31882.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinal
flagellar hook-associated protein 3
NECEvent2014_6_5_scaffold_865_8
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2987..4777)
DNA (1791bp) protein (597aa)
Flagellar hook-associated protein FlgK {ECO:0000313|EMBL:ENZ02284.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicani
flagellar hook-associated protein FlgK
NECEvent2014_6_5_scaffold_865_9
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4789..5199)
DNA (411bp) protein (137aa)
hypothetical protein
Putative FlgN protein protein {ECO:0000313|EMBL:CDH89731.1}; Uncharacterized protein {ECO:0000313|EMBL:ACD23088.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiacea
NECEvent2014_6_5_scaffold_865_10
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5192..5476)
DNA (285bp) protein (95aa)
negative regulator of flagellin synthesis
Flagellar biosynthesis anti-sigma factor FlgM {ECO:0000313|EMBL:KIL09012.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium bot
NECEvent2014_6_5_scaffold_865_11
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5629..6786)
DNA (1158bp) protein (386aa)
Flagellar motor switch protein {ECO:0000313|EMBL:ERK31951.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URN
flagellar motor switch protein
NECEvent2014_6_5_scaffold_865_12
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6773..7768)
DNA (996bp) protein (332aa)
fliM; flagellar motor switch protein FliM
Flagellar motor switch protein FliM {ECO:0000313|EMBL:ACD22898.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (
NECEvent2014_6_5_scaffold_865_13
Clostridium beijerinckii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7784..8182)
DNA (399bp) protein (133aa)
putative CheW protein
Putative CheW protein {ECO:0000313|EMBL:ABR36414.1}; TaxID=290402 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium beijerinckii (strain ATCC
NECEvent2014_6_5_scaffold_865_14
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8209..8571)
DNA (363bp) protein (121aa)
cheY6; chemotaxis protein CheY
Chemotaxis protein CheY {ECO:0000313|EMBL:AGX44938.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_5_scaffold_865_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8588..9187)
DNA (600bp) protein (200aa)
Chemotaxis protein CheY {ECO:0000313|EMBL:KHD15827.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
chemotaxis protein CheC
NECEvent2014_6_5_scaffold_865_16
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9209..10654)
DNA (1446bp) protein (482aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
cheA5; chemotaxis protein CheA (EC:2.7.13.3)
Displaying 16 items

View Taxonomy