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NECEvent2014_6_5_scaffold_907

Alias: 176_005_scaffold_907

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Displaying 14 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_907_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..421
DNA (420bp) protein (140aa)
pcrA; ATP-dependent DNA helicase PcrA (EC:3.6.4.12)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970, ECO:0000313|EMBL:AIY83000.1};; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
NECEvent2014_6_5_scaffold_907_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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442..2433
DNA (1992bp) protein (664aa)
DNA ligase {ECO:0000256|HAMAP-Rule:MF_01588}; EC=6.5.1.2 {ECO:0000256|HAMAP-Rule:MF_01588};; Polydeoxyribonucleotide synthase [NAD(+)] {ECO:0000256|HAMAP-Rule:MF_01588}; TaxID=457396 species="Bacteria
ligA; DNA ligase LigA (EC:6.5.1.2)
NECEvent2014_6_5_scaffold_907_3
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2435..2704
DNA (270bp) protein (90aa)
Membrane protein {ECO:0000313|EMBL:ETD67289.1}; TaxID=1428454 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum NRRL B-598.;"
hypothetical protein
NECEvent2014_6_5_scaffold_907_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2842..3153)
DNA (312bp) protein (104aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIY84103.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.
NECEvent2014_6_5_scaffold_907_5
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3296..4792
DNA (1497bp) protein (499aa)
extracellular solute-binding protein
Putative extracellular solute-binding protein {ECO:0000313|EMBL:ACD21762.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
NECEvent2014_6_5_scaffold_907_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4802..6385)
DNA (1584bp) protein (528aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30426.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_5_scaffold_907_7
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6414..7391
DNA (978bp) protein (326aa)
Hydrogenase maturation factor {ECO:0000313|EMBL:EKQ51834.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley M
AIR synthase-like protein
NECEvent2014_6_5_scaffold_907_8
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7409..8158
DNA (750bp) protein (250aa)
rph; ribonuclease PH (EC:2.7.7.56)
Ribonuclease PH {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS00104182}; Short=RNase PH {ECO:0000256|HAMAP-Rule:MF_00564};; EC=2.7.7.56 {ECO:0000256|HAMAP-Rule:MF_00564, ECO:0000256|SAAS:SAAS
NECEvent2014_6_5_scaffold_907_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8160..8771
DNA (612bp) protein (204aa)
Non-canonical purine NTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020486}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01405, ECO:0000256|SAAS:SAAS00020468};; Non-standard p
rdgB; non-canonical purine NTP pyrophosphatase, RdgB/HAM1 family
NECEvent2014_6_5_scaffold_907_10
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8773..9267
DNA (495bp) protein (165aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sou
phosphodiesterase
NECEvent2014_6_5_scaffold_907_trna_1
unknown

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9445..9517
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_907_trna_2
unknown

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9603..9676
DNA (74bp)
transferRNA
NECEvent2014_6_5_scaffold_907_trna_3
unknown

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9684..9756
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_907_trna_4
unknown

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9765..9836
DNA (72bp)
transferRNA
Displaying 14 items

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