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NECEvent2014_6_5_scaffold_1012

Alias: 176_005_scaffold_1012

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_1012_1
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1..831)
DNA (831bp) protein (277aa)
DNA mismatch repair protein MutS domain protein {ECO:0000313|EMBL:EHI99796.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
mutS2; DNA mismatch repair protein MutS
NECEvent2014_6_5_scaffold_1012_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1108..1776)
DNA (669bp) protein (223aa)
Uncharacterized protein {ECO:0000313|EMBL:EEH98275.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Two-component response regulator
NECEvent2014_6_5_scaffold_1012_3
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1754..2929)
DNA (1176bp) protein (392aa)
Putative Two-component sensor histidine kinase {ECO:0000313|EMBL:CDG02234.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
Two-component sensor histidine kinase
NECEvent2014_6_5_scaffold_1012_4
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3077..3313)
DNA (237bp) protein (79aa)
Ribonuclease P {ECO:0000313|EMBL:KJU73024.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
putative ribonuclease P protein component
NECEvent2014_6_5_scaffold_1012_5
unknown

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3469..3876
DNA (408bp) protein (136aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_1012_6
BJP_IG2102_Clostridiales_34_350, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3901..4248)
DNA (348bp) protein (116aa)
hypothetical protein
Tax=BJP_IG2102_Clostridiales_34_350
NECEvent2014_6_5_scaffold_1012_7
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4266..6221)
DNA (1956bp) protein (652aa)
Putative translation elongation factor G {ECO:0000313|EMBL:EKY25417.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatu
small GTP-binding protein
NECEvent2014_6_5_scaffold_1012_8
[Clostridium] bifermentans, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6312..6512)
DNA (201bp) protein (67aa)
BFD-like [2Fe-2S] binding domain protein {ECO:0000313|EMBL:EQK47010.1}; TaxID=1233170 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="[Clos
BFD-like iron-sulfur cluster-binding protein
NECEvent2014_6_5_scaffold_1012_9
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6537..6719)
DNA (183bp) protein (61aa)
Hypothetical Conserved domain protein {ECO:0000313|EMBL:CDG02316.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei
ferredoxin
NECEvent2014_6_5_scaffold_1012_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6819..7589)
DNA (771bp) protein (257aa)
Endonuclease/exonuclease/phosphatase {ECO:0000313|EMBL:EEP53567.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
endonuclease/exonuclease/phosphatase family protein
NECEvent2014_6_5_scaffold_1012_11
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(7754..8374)
DNA (621bp) protein (207aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ88152.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
hypothetical protein
NECEvent2014_6_5_scaffold_1012_12
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8407..8820)
DNA (414bp) protein (138aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY24020.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_5_scaffold_1012_13
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8833..9333)
DNA (501bp) protein (167aa)
Uncharacterized protein {ECO:0000313|EMBL:KEZ86174.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
ferripyochelin binding protein
NECEvent2014_6_5_scaffold_1012_14
Cellulophaga algicola, Cellulophaga, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

Not on your lists

9441..10529
DNA (1089bp) protein (363aa)
hypothetical protein
UPF0145 protein ybjQ {ECO:0000313|EMBL:ADV47885.1}; TaxID=688270 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Cellulophaga.;" source="Cellulophaga algicola (s
NECEvent2014_6_5_scaffold_1012_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10585..12933)
DNA (2349bp) protein (783aa)
sensory box histidine kinase (EC:2.7.3.-)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=289380 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
NECEvent2014_6_5_scaffold_1012_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(12955..15786)
DNA (2832bp) protein (944aa)
Exonuclease {ECO:0000313|EMBL:KIL07318.1}; TaxID=1491 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum.;"
putative exonuclease
NECEvent2014_6_5_scaffold_1012_17
Clostridium sp. CAG:265, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15909..16121)
DNA (213bp) protein (71aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=1262787 species="Bacteria; Firmicutes; Clostridia;
ackA; acetate kinase (EC:2.7.2.1)
Displaying 17 items

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