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NECEvent2014_6_5_scaffold_1036

Alias: 176_005_scaffold_1036

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_1036_1
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..85)
DNA (84bp) protein (28aa)
Uncharacterized protein {ECO:0000313|EMBL:AIY82107.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
cold-shock deAd box protein a
NECEvent2014_6_5_scaffold_1036_2
Pantoea ananatis, Pantoea, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

361..672
DNA (312bp) protein (104aa)
celA; CelA
CelA {ECO:0000313|EMBL:ADD76096.1}; TaxID=706191 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Pantoea.;" source="Pantoea ananatis (strain LMG 20103).;
NECEvent2014_6_5_scaffold_1036_3
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

674..3421
DNA (2748bp) protein (916aa)
PTS system transcriptional activator {ECO:0000313|EMBL:ERK28972.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestina
PTS system transcriptional activator
NECEvent2014_6_5_scaffold_1036_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3589..3900
DNA (312bp) protein (104aa)
Lichenan-specific phosphotransferase enzyme IIB component {ECO:0000313|EMBL:EQF22432.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EQF22432.1};; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridia
phosphotransferase system cellobiose-specific component IIB (EC:2.7.1.69)
NECEvent2014_6_5_scaffold_1036_5
Bacillus vireti, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

3903..5222
DNA (1320bp) protein (440aa)
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=1131730 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus vireti LMG 21834.;"
PTS system lichenan-specific transporter subunit IIC
NECEvent2014_6_5_scaffold_1036_6
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5248..6336
DNA (1089bp) protein (363aa)
Uncharacterized protein {ECO:0000313|EMBL:ENY99792.1}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium colicanis 209318.;"
hypothetical protein
NECEvent2014_6_5_scaffold_1036_7
Pelosinus fermentans, Pelosinus, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

6338..6640
DNA (303bp) protein (101aa)
phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
Phosphotransferase system PTS lactose/cellobiose-specific IIA subunit {ECO:0000313|EMBL:EIW17331.1}; TaxID=1149862 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Pelos
NECEvent2014_6_5_scaffold_1036_8
Bacillus sonorensis, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

6651..8051
DNA (1401bp) protein (467aa)
Phospho-beta-glucosidase BglH {ECO:0000313|EMBL:EME73776.1}; TaxID=1274524 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus sonorensis L12.;"
BglH
NECEvent2014_6_5_scaffold_1036_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8259..8684
DNA (426bp) protein (142aa)
Methylase involved in ubiquinone/menaquinone biosynthesis
Methyltransferase domain protein {ECO:0000313|EMBL:EDP22416.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium pra
NECEvent2014_6_5_scaffold_1036_10
Clostridium sp. HMP27, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8722..9474
DNA (753bp) protein (251aa)
tRNA pseudouridine synthase A {ECO:0000256|HAMAP-Rule:MF_00171}; EC=5.4.99.12 {ECO:0000256|HAMAP-Rule:MF_00171};; tRNA pseudouridine(38-40) synthase {ECO:0000256|HAMAP-Rule:MF_00171}; tRNA pseudouridy
truA; tRNA pseudouridine(38-40) synthase (EC:5.4.99.12)
NECEvent2014_6_5_scaffold_1036_11
unknown

Not on your lists

9898..10002
DNA (105bp) protein (35aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_1036_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10015..11358
DNA (1344bp) protein (448aa)
Magnesium transporter MgtE {ECO:0000256|RuleBase:RU362011}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mgtE; magnesium transporter
NECEvent2014_6_5_scaffold_1036_13
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11380..11682
DNA (303bp) protein (101aa)
Uncharacterized protein {ECO:0000313|EMBL:EKY22060.1}; TaxID=545697 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium celatum DSM 1785.;"
hypothetical protein
NECEvent2014_6_5_scaffold_1036_14
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11701..12129)
DNA (429bp) protein (143aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJU71235.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_1036_15
[Clostridium] sordellii, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12209..13276
DNA (1068bp) protein (356aa)
Serine/threonine-protein kinase Sps1 {ECO:0000313|EMBL:CEN82279.1}; EC=2.7.11.1 {ECO:0000313|EMBL:CEN82279.1};; TaxID=1505 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcace
kinase domain protein
NECEvent2014_6_5_scaffold_1036_16
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13380..13790
DNA (411bp) protein (137aa)
Uncharacterized protein {ECO:0000313|EMBL:KHS55941.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othin
NECEvent2014_6_5_scaffold_1036_17
Clostridium autoethanogenum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13913..14137
DNA (225bp) protein (75aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGY75206.1}; TaxID=1341692 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium autoethanogenum DSM 10
NECEvent2014_6_5_scaffold_1036_18
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14316..15971
DNA (1656bp) protein (552aa)
Sulfate transporter {ECO:0000313|EMBL:EOR24945.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
sulfate transporter
Displaying 18 items

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