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NECEvent2014_6_5_scaffold_1225

Alias: 176_005_scaffold_1225

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Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_1225_1
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..1543)
DNA (1542bp) protein (514aa)
transposase DDE domain protein rbh
Transposase DDE domain protein {ECO:0000313|EMBL:AIY83650.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Su
NECEvent2014_6_5_scaffold_1225_2
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(1618..2733)
DNA (1116bp) protein (372aa)
glycosyl transferases group 1 family protein
Glycosyl transferases group 1 family protein {ECO:0000313|EMBL:AIY82736.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
NECEvent2014_6_5_scaffold_1225_3
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2867..3079)
DNA (213bp) protein (71aa)
50S ribosomal protein L31 {ECO:0000256|HAMAP-Rule:MF_00501, ECO:0000256|SAAS:SAAS00004482}; TaxID=999411 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source
rpmE; 50S ribosomal protein L31
NECEvent2014_6_5_scaffold_1225_4
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3254..3628
DNA (375bp) protein (125aa)
Thymidine kinase {ECO:0000256|RuleBase:RU000544}; EC=2.7.1.21 {ECO:0000256|RuleBase:RU000544};; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
thymidine kinase family protein
NECEvent2014_6_5_scaffold_1225_5
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3641..5431
DNA (1791bp) protein (597aa)
Putative Modification methylase, HemK family {ECO:0000313|EMBL:CDG02668.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium c
HemK family modification methylase
NECEvent2014_6_5_scaffold_1225_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5494..6576
DNA (1083bp) protein (361aa)
Peptide chain release factor 1 {ECO:0000256|HAMAP-Rule:MF_00093}; Short=RF-1 {ECO:0000256|HAMAP-Rule:MF_00093};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae;
prfA; peptide chain release factor 1
NECEvent2014_6_5_scaffold_1225_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6616..7221
DNA (606bp) protein (202aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX41525.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM
NECEvent2014_6_5_scaffold_1225_8
Clostridium celatum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7176..8288
DNA (1113bp) protein (371aa)
Threonylcarbamoyl-AMP synthase {ECO:0000256|PIRNR:PIRNR004930}; Short=TC-AMP synthase {ECO:0000256|PIRNR:PIRNR004930};; EC=2.7.7.87 {ECO:0000256|PIRNR:PIRNR004930};; L-threonylcarbamoyladenylate synth
tRNA threonylcarbamoyl adenosine modification protein, Sua5/YciO/YrdC/YwlC family
NECEvent2014_6_5_scaffold_1225_9
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8301..8729
DNA (429bp) protein (143aa)
Protein tyrosine phosphatase {ECO:0000313|EMBL:KJU73134.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
low molecular weight phosphotyrosine phosphatase family protein
NECEvent2014_6_5_scaffold_1225_10
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8733..9239
DNA (507bp) protein (169aa)
rpiB; ribose 5-phosphate isomerase B (EC:5.3.1.6)
Ribose 5-phosphate isomerase {ECO:0000313|EMBL:KJU73135.1}; TaxID=1561 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii.;"
NECEvent2014_6_5_scaffold_1225_11
Clostridium colicanis, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9256..9375
DNA (120bp) protein (40aa)
Uracil phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084530}; EC=2.4.2.9 {ECO:0000256|HAMAP-Rule:MF_01218, ECO:0000256|SAAS:SAAS00084480};; UMP pyrophosphorylase {
upp; uracil phosphoribosyltransferase (EC:2.4.2.9)
Displaying 11 items

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