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NECEvent2014_6_5_scaffold_175

Alias: 176_005_scaffold_175

Search features with annotation key words

Displaying items 1-30 of 56 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_175_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1..768)
DNA (768bp) protein (256aa)
Formate dehydrogenase-O major subunit {ECO:0000313|EMBL:ETX61082.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
formate dehydrogenase
NECEvent2014_6_5_scaffold_175_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(817..1425)
DNA (609bp) protein (203aa)
Formate dehydrogenase-O major subunit {ECO:0000313|EMBL:ETX67056.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
sulfate ABC transporter substrate-binding protein
NECEvent2014_6_5_scaffold_175_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1657..2433
DNA (777bp) protein (259aa)
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
formate dehydrogenase
NECEvent2014_6_5_scaffold_175_4
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2562..2774
DNA (213bp) protein (71aa)
Uncharacterized protein {ECO:0000313|EMBL:CEJ66553.1}; TaxID=1563222 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
hypothetical protein
NECEvent2014_6_5_scaffold_175_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2817..3140)
DNA (324bp) protein (108aa)
Inner membrane protein {ECO:0000313|EMBL:ETX67059.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
branched-chain amino acid transport
NECEvent2014_6_5_scaffold_175_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3140..3799)
DNA (660bp) protein (220aa)
Branched-chain amino acid ABC transporter permease {ECO:0000313|EMBL:KJC07406.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter;
branched-chain amino acid ABC transporter permease
NECEvent2014_6_5_scaffold_175_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3901..4449
DNA (549bp) protein (183aa)
DNA-binding protein {ECO:0000313|EMBL:KJC04048.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
DNA-binding protein
NECEvent2014_6_5_scaffold_175_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4507..4821)
DNA (315bp) protein (105aa)
L-rhamnose mutarotase {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00048862}; EC=5.1.3.32 {ECO:0000256|HAMAP-Rule:MF_01663, ECO:0000256|SAAS:SAAS00169483};; Rhamnose 1-epimerase {ECO:0000256
L-rhamnose mutarotase
NECEvent2014_6_5_scaffold_175_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4818..5966)
DNA (1149bp) protein (383aa)
Lactaldehyde dehydrogenase involved in fucose or rhamnose utilization {ECO:0000313|EMBL:CDL38433.1}; EC=1.2.1.22 {ECO:0000313|EMBL:CDL38433.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammap
alcohol dehydrogenase
NECEvent2014_6_5_scaffold_175_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5978..6802)
DNA (825bp) protein (275aa)
Rhamnulose-1-phosphate aldolase {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955}; EC=4.1.2.19 {ECO:0000256|HAMAP-Rule:MF_00770, ECO:0000256|SAAS:SAAS00048955};; TaxID=546 species="Bact
rhamnulose-1-phosphate aldolase (EC:4.1.2.19)
NECEvent2014_6_5_scaffold_175_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6946..8205)
DNA (1260bp) protein (420aa)
L-rhamnose isomerase {ECO:0000256|HAMAP-Rule:MF_00541}; EC=5.3.1.14 {ECO:0000256|HAMAP-Rule:MF_00541};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
sugar isomerase (EC:5.3.1.14)
NECEvent2014_6_5_scaffold_175_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8202..9671)
DNA (1470bp) protein (490aa)
Rhamnulokinase {ECO:0000256|HAMAP-Rule:MF_01535}; Short=RhaB {ECO:0000256|HAMAP-Rule:MF_01535};; EC=2.7.1.5 {ECO:0000256|HAMAP-Rule:MF_01535};; ATP:L-rhamnulose phosphotransferase {ECO:0000256|HAMAP-R
rhamnulokinase
NECEvent2014_6_5_scaffold_175_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9975..10823
DNA (849bp) protein (283aa)
HTH-type transcriptional activator RhaS {ECO:0000256|HAMAP-Rule:MF_01534, ECO:0000256|SAAS:SAAS00011458}; L-rhamnose operon regulatory protein RhaS {ECO:0000256|HAMAP-Rule:MF_01534}; TaxID=546 species
AraC family transcriptional regulator
NECEvent2014_6_5_scaffold_175_14
Citrobacter werkmanii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10981..11829
DNA (849bp) protein (283aa)
HTH-type transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; L-rhamnose operon transcriptional activator RhaR {ECO:0000256|HAMAP-Rule:MF_01533}; TaxID=1114921 species="Bacteria; Proteoba
rhaR; L-rhamnose operon transcriptional activator
NECEvent2014_6_5_scaffold_175_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11826..12860)
DNA (1035bp) protein (345aa)
L-rhamnose-proton symporter {ECO:0000256|HAMAP-Rule:MF_01532, ECO:0000256|SAAS:SAAS00088063}; L-rhamnose-H(+) transport protein {ECO:0000256|HAMAP-Rule:MF_01532}; TaxID=1400136 species="Bacteria; Prot
rhamnose:proton symporter
NECEvent2014_6_5_scaffold_175_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13149..13769
DNA (621bp) protein (207aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
superoxide dismutase
NECEvent2014_6_5_scaffold_175_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14003..14986
DNA (984bp) protein (328aa)
2-keto-3-deoxygluconate permease {ECO:0000256|HAMAP-Rule:MF_00070}; Short=KDG permease {ECO:0000256|HAMAP-Rule:MF_00070};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
2-keto-3-deoxygluconate permease
NECEvent2014_6_5_scaffold_175_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15028..15924)
DNA (897bp) protein (299aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX67074.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
dihydrodipicolinate synthase
NECEvent2014_6_5_scaffold_175_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16077..16751
DNA (675bp) protein (225aa)
6-N-hydroxylaminopurine resistance protein {ECO:0000313|EMBL:KJC07419.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobac
6-N-hydroxylaminopurine resistance protein
NECEvent2014_6_5_scaffold_175_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16980..17684
DNA (705bp) protein (235aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX67076.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
GntR family transcriptional regulator
NECEvent2014_6_5_scaffold_175_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17693..18649
DNA (957bp) protein (319aa)
Sugar phosphate isomerase {ECO:0000313|EMBL:ETX67077.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
xylose isomerase domain-containing protein TIM barrel
NECEvent2014_6_5_scaffold_175_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18761..20017
DNA (1257bp) protein (419aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX67078.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
MFS family transporter
NECEvent2014_6_5_scaffold_175_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20059..21432)
DNA (1374bp) protein (458aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
cpxA; two-component sensor protein
NECEvent2014_6_5_scaffold_175_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21429..22127)
DNA (699bp) protein (233aa)
Transcriptional regulatory protein CpxR {ECO:0000313|EMBL:ETX61107.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citroba
transcriptional regulator
NECEvent2014_6_5_scaffold_175_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22278..22778
DNA (501bp) protein (167aa)
Periplasmic protein CpxP {ECO:0000313|EMBL:ETX61108.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
cpxP; periplasmic repressor CpxP
NECEvent2014_6_5_scaffold_175_26
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22946..23926)
DNA (981bp) protein (327aa)
Uncharacterized protein {ECO:0000313|EMBL:EOQ44834.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
integrase
NECEvent2014_6_5_scaffold_175_27
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23993..24298)
DNA (306bp) protein (102aa)
Uncharacterized protein {ECO:0000313|EMBL:EOQ44835.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
repressor
NECEvent2014_6_5_scaffold_175_28
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24407..24688
DNA (282bp) protein (94aa)
Uncharacterized protein {ECO:0000313|EMBL:EOQ44836.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter s
regulatory protein
NECEvent2014_6_5_scaffold_175_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25127..25354
DNA (228bp) protein (76aa)
Uncharacterized protein {ECO:0000313|EMBL:ELC13248.1}; TaxID=1169330 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_6_5_scaffold_175_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25406..25804
DNA (399bp) protein (133aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KJC07244.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
Displaying items 1-30 of 56 in total

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