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NECEvent2014_6_5_scaffold_197

Alias: 176_005_scaffold_197

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_197_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(317..1546)
DNA (1230bp) protein (410aa)
Transporter {ECO:0000313|EMBL:KJC12826.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source=
transporter
NECEvent2014_6_5_scaffold_197_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1689..2144)
DNA (456bp) protein (152aa)
Uncharacterized protein {ECO:0000313|EMBL:CDL39252.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
Na(+)-translocating NADH-quinone reductase subunit E
NECEvent2014_6_5_scaffold_197_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2246..3130
DNA (885bp) protein (295aa)
LysR family transcriptional regulator {ECO:0000313|EMBL:ETX68409.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
LysR family transcriptional regulator rbh
NECEvent2014_6_5_scaffold_197_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3233..4411
DNA (1179bp) protein (393aa)
acetyl-CoA acetyltransferase (EC:2.3.1.9)
Acetyl-CoA C-acetyltransferase family protein {ECO:0000313|EMBL:KEL79584.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
NECEvent2014_6_5_scaffold_197_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4883..5719
DNA (837bp) protein (279aa)
4-deoxy-L-threo-5-hexosulose-uronate ketol-isomerase {ECO:0000256|HAMAP-Rule:MF_00687}; EC=5.3.1.17 {ECO:0000256|HAMAP-Rule:MF_00687};; 5-keto-4-deoxyuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00687
5-keto-4-deoxyuronate isomerase (EC:5.3.1.17)
NECEvent2014_6_5_scaffold_197_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5777..6538
DNA (762bp) protein (254aa)
2-deoxy-D-gluconate 3-dehydrogenase
2-deoxy-D-gluconate 3-dehydrogenase {ECO:0000313|EMBL:AHY10182.1}; TaxID=1333848 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
NECEvent2014_6_5_scaffold_197_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6853..8271
DNA (1419bp) protein (473aa)
Arabinose-proton symporter {ECO:0000313|EMBL:ETX62121.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
arabinose:proton symporter
NECEvent2014_6_5_scaffold_197_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8345..8671)
DNA (327bp) protein (109aa)
Cupin {ECO:0000313|EMBL:ETX62120.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="C
cupin
NECEvent2014_6_5_scaffold_197_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8810..9520
DNA (711bp) protein (237aa)
Racemase {ECO:0000313|EMBL:KJC12818.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Ci
racemase
NECEvent2014_6_5_scaffold_197_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9492..10427)
DNA (936bp) protein (312aa)
Transcriptional activator protein LysR {ECO:0000313|EMBL:CDL39243.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source
transcriptional regulator
NECEvent2014_6_5_scaffold_197_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10546..11802
DNA (1257bp) protein (419aa)
diaminopimelate decarboxylase (EC:4.1.1.20)
Diaminopimelate decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120, ECO:0000256|RuleBase:RU003738}; Short=DAP decarboxylase {ECO:0000256|HAMAP-Rule:MF_02120};; Short=DAPDC {ECO:0000256|HAMAP-Rule:MF_02120
NECEvent2014_6_5_scaffold_197_12
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11910..12920)
DNA (1011bp) protein (337aa)
Galactose operon repressor, GalR-LacI family of transcriptional regulators {ECO:0000313|EMBL:CDL39240.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enter
LacI family transcriptional regulator
NECEvent2014_6_5_scaffold_197_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12934..13962)
DNA (1029bp) protein (343aa)
HTH-type transcriptional regulator galR {ECO:0000313|EMBL:ETX62115.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citroba
transcriptional regulator
NECEvent2014_6_5_scaffold_197_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14560..16719
DNA (2160bp) protein (720aa)
Bifunctional protein Aas {ECO:0000256|HAMAP-Rule:MF_01162, ECO:0000256|SAAS:SAAS00010159}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
acyl-ACP synthetase
NECEvent2014_6_5_scaffold_197_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16712..17905
DNA (1194bp) protein (398aa)
Lysophospholipid transporter LplT {ECO:0000256|HAMAP-Rule:MF_01585, ECO:0000256|SAAS:SAAS00010763}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
lysophospholipid transporter LplT
NECEvent2014_6_5_scaffold_197_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17988..19028)
DNA (1041bp) protein (347aa)
Aldo/keto reductase {ECO:0000313|EMBL:KJC06929.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
tas; aldo/keto reductase
NECEvent2014_6_5_scaffold_197_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19135..19353)
DNA (219bp) protein (73aa)
Lipoprotein {ECO:0000313|EMBL:ETX68395.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sou
ygdR; hypothetical protein
NECEvent2014_6_5_scaffold_197_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19498..20211)
DNA (714bp) protein (238aa)
Inner membrane protein {ECO:0000313|EMBL:ETX62110.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii com
membrane protein
NECEvent2014_6_5_scaffold_197_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20287..20982)
DNA (696bp) protein (232aa)
DNA mismatch repair protein MutH {ECO:0000256|HAMAP-Rule:MF_00759, ECO:0000256|SAAS:SAAS00057435}; Methyl-directed mismatch repair protein {ECO:0000256|HAMAP-Rule:MF_00759}; TaxID=1444046 species="Bac
DNA mismatch repair protein
NECEvent2014_6_5_scaffold_197_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21667..22197
DNA (531bp) protein (177aa)
RNA pyrophosphohydrolase {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016246}; EC=3.6.1.- {ECO:0000256|HAMAP-Rule:MF_00298, ECO:0000256|SAAS:SAAS00016219};; (Di)nucleoside polyphosphate hy
RNA pyrophosphohydrolase (EC:3.6.1.-)
NECEvent2014_6_5_scaffold_197_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22210..24456
DNA (2247bp) protein (749aa)
Phosphoenolpyruvate-protein phosphotransferase {ECO:0000313|EMBL:KEL79604.1}; EC=2.7.3.9 {ECO:0000313|EMBL:KEL79604.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
phosphoenolpyruvate-protein phosphotransferase
NECEvent2014_6_5_scaffold_197_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24645..25520
DNA (876bp) protein (292aa)
Prolipoprotein diacylglyceryl transferase {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117220}; EC=2.4.99.- {ECO:0000256|HAMAP-Rule:MF_01147, ECO:0000256|SAAS:SAAS00117311};; TaxID=546 spe
diacylglyceryl transferase
NECEvent2014_6_5_scaffold_197_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

25527..26321
DNA (795bp) protein (265aa)
Thymidylate synthase {ECO:0000256|HAMAP-Rule:MF_00008, ECO:0000256|SAAS:SAAS00215270}; Short=TS {ECO:0000256|HAMAP-Rule:MF_00008};; Short=TSase {ECO:0000256|HAMAP-Rule:MF_00008};; EC=2.1.1.45 {ECO:000
thymidylate synthase
NECEvent2014_6_5_scaffold_197_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26505..26975
DNA (471bp) protein (157aa)
Prepilin peptidase dependent protein A {ECO:0000313|EMBL:ETX68388.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobac
hypothetical protein
NECEvent2014_6_5_scaffold_197_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26966..27529
DNA (564bp) protein (188aa)
Prepilin-type N-terminal cleavage/methylation domain protein {ECO:0000313|EMBL:KEL79608.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
hypothetical protein
NECEvent2014_6_5_scaffold_197_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27526..27933
DNA (408bp) protein (136aa)
Uncharacterized protein {ECO:0000313|EMBL:KEL79609.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_6_5_scaffold_197_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27918..28241
DNA (324bp) protein (108aa)
Prepilin peptidase-dependent protein C {ECO:0000313|EMBL:ETX68385.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobac
hypothetical protein
NECEvent2014_6_5_scaffold_197_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28254..31622
DNA (3369bp) protein (1123aa)
RecBCD enzyme subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01486};; Exonuclease V subunit RecC {ECO:0000256|HAMAP-Rule:MF_01486}; Helicase/nuclease RecBCD sub
recC; exonuclease V subunit gamma (EC:3.1.11.5)
NECEvent2014_6_5_scaffold_197_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

31802..34690
DNA (2889bp) protein (963aa)
Protease 3 {ECO:0000313|EMBL:ETX68383.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sour
protease rbh
NECEvent2014_6_5_scaffold_197_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

34683..38228
DNA (3546bp) protein (1182aa)
RecBCD enzyme subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; EC=3.1.11.5 {ECO:0000256|HAMAP-Rule:MF_01485};; Exonuclease V subunit RecB {ECO:0000256|HAMAP-Rule:MF_01485}; Helicase/nuclease RecBCD sub
recB; exonuclease V subunit beta (EC:3.1.11.5)
Displaying items 1-30 of 32 in total

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