ggKbase home page

NECEvent2014_6_5_scaffold_212

Alias: 176_005_scaffold_212

Search features with annotation key words

Displaying items 1-30 of 36 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_212_1
Citrobacter sp. CIP 55.13, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(29..1156)
DNA (1128bp) protein (376aa)
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzym
NECEvent2014_6_5_scaffold_212_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1212..2282)
DNA (1071bp) protein (357aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};;
queA; S-adenosylmethionine:tRNA ribosyltransferase-isomerase (EC:5.-.-.-)
NECEvent2014_6_5_scaffold_212_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2355..2954
DNA (600bp) protein (200aa)
Acyl carrier protein phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01950}; Short=ACP phosphodiesterase {ECO:0000256|HAMAP-Rule:MF_01950};; EC=3.1.4.14 {ECO:0000256|HAMAP-Rule:MF_01950};; TaxID=546 spec
ACP phosphodiesterase (EC:3.1.4.14)
NECEvent2014_6_5_scaffold_212_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3123..3725
DNA (603bp) protein (201aa)
peroxiredoxin rbh
Peroxiredoxin {ECO:0000313|EMBL:KJC08130.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sourc
NECEvent2014_6_5_scaffold_212_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3847..5715)
DNA (1869bp) protein (623aa)
Amidohydrolase {ECO:0000313|EMBL:KJC08133.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sour
amidohydrolase
NECEvent2014_6_5_scaffold_212_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5737..6282)
DNA (546bp) protein (182aa)
Antibiotic biosynthesis monooxygenase family protein {ECO:0000313|EMBL:KEL80497.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
antibiotic biosynthesis monooxygenase
NECEvent2014_6_5_scaffold_212_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6456..7097)
DNA (642bp) protein (214aa)
Isochorismatase {ECO:0000313|EMBL:ETX72478.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
hydrolase
NECEvent2014_6_5_scaffold_212_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7371..8273
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72477.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
LysR family transcriptional regulator
NECEvent2014_6_5_scaffold_212_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8267..10084)
DNA (1818bp) protein (606aa)
Maltodextrin glucosidase {ECO:0000313|EMBL:ETX72476.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
maltodextrin glucosidase
NECEvent2014_6_5_scaffold_212_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10223..11596)
DNA (1374bp) protein (458aa)
Proline-specific permease ProY {ECO:0000313|EMBL:ETX72475.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
proY; proline-specific permease
NECEvent2014_6_5_scaffold_212_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11678..12997)
DNA (1320bp) protein (440aa)
Branched-chain amino acid transport system 2 carrier protein {ECO:0000313|EMBL:ETX72474.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
branched-chain amino acid ABC transporter substrate-binding protein
NECEvent2014_6_5_scaffold_212_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13403..14698)
DNA (1296bp) protein (432aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriac
phoR; phosphate regulon sensor protein (EC:2.7.13.3)
NECEvent2014_6_5_scaffold_212_13
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14749..15438)
DNA (690bp) protein (230aa)
transcriptional regulator PhoB
Transcriptional regulator PhoB {ECO:0000313|EMBL:KKC63613.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobac
NECEvent2014_6_5_scaffold_212_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15629..16831
DNA (1203bp) protein (401aa)
Exonuclease SbcD {ECO:0000313|EMBL:KJC13131.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
exonuclease SbcD
NECEvent2014_6_5_scaffold_212_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16828..19971
DNA (3144bp) protein (1048aa)
Nuclease sbcCD subunit C {ECO:0000313|EMBL:ETX72470.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
exonuclease SbcC
NECEvent2014_6_5_scaffold_212_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20062..21336
DNA (1275bp) protein (425aa)
Protein AraJ {ECO:0000313|EMBL:ETX72469.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
MFS transporter
NECEvent2014_6_5_scaffold_212_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21344..22252)
DNA (909bp) protein (303aa)
Fructokinase {ECO:0000313|EMBL:KJC08144.1}; EC=2.7.1.4 {ECO:0000313|EMBL:KJC08144.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobac
fructokinase (EC:2.7.1.4)
NECEvent2014_6_5_scaffold_212_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22344..23255
DNA (912bp) protein (304aa)
recombination associated protein
Recombination-associated protein RdgC {ECO:0000256|HAMAP-Rule:MF_00194, ECO:0000256|SAAS:SAAS00073315}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacte
NECEvent2014_6_5_scaffold_212_19
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23305..23589)
DNA (285bp) protein (95aa)
UPF0345 protein YaiE {ECO:0000256|HAMAP-Rule:MF_01537}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexner
hypothetical protein
NECEvent2014_6_5_scaffold_212_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23661..24338)
DNA (678bp) protein (226aa)
Protein AroM {ECO:0000313|EMBL:ETX72465.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
AroM protein
NECEvent2014_6_5_scaffold_212_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24585..24776)
DNA (192bp) protein (64aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC08148.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_5_scaffold_212_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24803..25348)
DNA (546bp) protein (182aa)
Shikimate kinase 2 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS00003442}; Short=SK 2 {ECO:0000256|HAMAP-Rule:MF_01269};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_01269, ECO:0000256|SAAS:SAAS0
aroL; shikimate kinase (EC:2.7.1.71)
NECEvent2014_6_5_scaffold_212_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25535..25990)
DNA (456bp) protein (152aa)
UPF0178 protein TN42_02750 {ECO:0000256|HAMAP-Rule:MF_00489}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
hypothetical protein
NECEvent2014_6_5_scaffold_212_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26180..26989
DNA (810bp) protein (270aa)
pyrroline-5-carboxylate reductase (EC:1.5.1.2) rbh
Pyrroline-5-carboxylate reductase {ECO:0000256|HAMAP-Rule:MF_01925, ECO:0000256|RuleBase:RU003903}; Short=P5C reductase {ECO:0000256|HAMAP-Rule:MF_01925};; Short=P5CR {ECO:0000256|HAMAP-Rule:MF_01925}
NECEvent2014_6_5_scaffold_212_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27007..27909)
DNA (903bp) protein (301aa)
Putative diguanylate cyclase AdrA {ECO:0000313|EMBL:KEL80517.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esc
adrA; diguanylate cyclase
NECEvent2014_6_5_scaffold_212_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28214..28534)
DNA (321bp) protein (107aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC13120.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_5_scaffold_212_27
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28632..30047)
DNA (1416bp) protein (472aa)
Alkaline phosphatase {ECO:0000313|EMBL:CDL37488.1}; EC=3.1.3.1 {ECO:0000313|EMBL:CDL37488.1};; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriace
alkaline phosphatase
NECEvent2014_6_5_scaffold_212_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30152..30394)
DNA (243bp) protein (81aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72457.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
anti-RssB factor
NECEvent2014_6_5_scaffold_212_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(30643..31839)
DNA (1197bp) protein (399aa)
Sugar (And other) transporter family protein {ECO:0000313|EMBL:KEL80521.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
multidrug transporter
NECEvent2014_6_5_scaffold_212_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

32123..33235
DNA (1113bp) protein (371aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000
D-alanine--D-alanine ligase
Displaying items 1-30 of 36 in total

View Taxonomy