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NECEvent2014_6_5_scaffold_214

Alias: 176_005_scaffold_214

Search features with annotation key words

Displaying items 1-30 of 37 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_214_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2..145
DNA (144bp) protein (48aa)
glpA; glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Glycerol-3-phosphate dehydrogenase {ECO:0000256|RuleBase:RU361217}; EC=1.1.5.3 {ECO:0000256|RuleBase:RU361217};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
NECEvent2014_6_5_scaffold_214_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

135..1394
DNA (1260bp) protein (420aa)
glycerol-3-phosphate dehydrogenase (EC:1.1.5.3)
Anaerobic glycerol-3-phosphate dehydrogenase subunit B {ECO:0000256|HAMAP-Rule:MF_00753}; Short=Anaerobic G-3-P dehydrogenase subunit B {ECO:0000256|HAMAP-Rule:MF_00753};; Short=Anaerobic G3Pdhase B {
NECEvent2014_6_5_scaffold_214_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1391..2581
DNA (1191bp) protein (397aa)
Anaerobic glycerol-3-phosphate dehydrogenase subunit C {ECO:0000313|EMBL:ETX69628.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citro
glpC; glycerol-3-phosphate dehydrogenase
NECEvent2014_6_5_scaffold_214_4
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2765..3715
DNA (951bp) protein (317aa)
Uncharacterized protein {ECO:0000313|EMBL:EIQ74330.1}; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Shigella.;" source="Shigella flexneri
Uncharacterized protein YfaD
NECEvent2014_6_5_scaffold_214_5
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3759..4562)
DNA (804bp) protein (268aa)
2-keto-3-deoxy-L-rhamnonate aldolase {ECO:0000256|HAMAP-Rule:MF_01290}; Short=KDR aldolase {ECO:0000256|HAMAP-Rule:MF_01290};; EC=4.1.2.53 {ECO:0000256|HAMAP-Rule:MF_01290};; 2-dehydro-3-deoxyrhamnona
carbon-carbon lyase
NECEvent2014_6_5_scaffold_214_6
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4577..5866)
DNA (1290bp) protein (430aa)
Inner membrane transporter RhmT {ECO:0000313|EMBL:EOQ48697.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citro
yfaV; putative transport protein
NECEvent2014_6_5_scaffold_214_7
Enterobacter lignolyticus, Enterobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5923..7128)
DNA (1206bp) protein (402aa)
L-rhamnonate dehydratase {ECO:0000256|HAMAP-Rule:MF_01288}; Short=RhamD {ECO:0000256|HAMAP-Rule:MF_01288};; EC=4.2.1.90 {ECO:0000256|HAMAP-Rule:MF_01288};; TaxID=701347 species="Bacteria; Proteobacter
mandelate racemase/muconate lactonizing protein
NECEvent2014_6_5_scaffold_214_8
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7142..7924)
DNA (783bp) protein (261aa)
Transcriptional regulator {ECO:0000313|EMBL:EOQ48699.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter
IclR family transcriptional regulator
NECEvent2014_6_5_scaffold_214_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8143..9345)
DNA (1203bp) protein (401aa)
CinA-like protein {ECO:0000256|HAMAP-Rule:MF_00226}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.
hypothetical protein
NECEvent2014_6_5_scaffold_214_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9425..9967)
DNA (543bp) protein (181aa)
Outer membrane porin {ECO:0000313|EMBL:ETX69630.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii compl
membrane protein
NECEvent2014_6_5_scaffold_214_11
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10285..10710
DNA (426bp) protein (142aa)
Nucleoside triphosphatase NudI {ECO:0000256|HAMAP-Rule:MF_01846}; EC=3.6.1.19 {ECO:0000256|HAMAP-Rule:MF_01846};; Pyrimidine deoxynucleoside triphosphate diphosphatase {ECO:0000256|HAMAP-Rule:MF_01846
nucleoside triphosphatase
NECEvent2014_6_5_scaffold_214_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10995..12134
DNA (1140bp) protein (380aa)
UDP-4-amino-4-deoxy-L-arabinose--oxoglutarate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01167, ECO:0000256|SAAS:SAAS00016536}; EC=2.6.1.87 {ECO:0000256|HAMAP-Rule:MF_01167};; UDP-(beta-L-threo-penta
UDP-4-amino-4-deoxy-L-arabinose-oxoglutarate aminotransferase
NECEvent2014_6_5_scaffold_214_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12137..13120
DNA (984bp) protein (328aa)
Undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase {ECO:0000256|HAMAP-Rule:MF_01164, ECO:0000256|SAAS:SAAS00016541}; EC=2.4.2.53 {ECO:0000256|HAMAP-Rule:MF_01164};; Undecaprenyl-phosph
UDP phosphate 4-deoxy-4-formamido-L-arabinose transferase
NECEvent2014_6_5_scaffold_214_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

13117..15099
DNA (1983bp) protein (661aa)
Bifunctional polymyxin resistance protein ArnA {ECO:0000256|HAMAP-Rule:MF_01166, ECO:0000256|SAAS:SAAS00018678}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
UDP-4-amino-4-deoxy-L-arabinose formyltransferase
NECEvent2014_6_5_scaffold_214_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15096..15998
DNA (903bp) protein (301aa)
Probable 4-deoxy-4-formamido-L-arabinose-phosphoundecaprenol deformylase ArnD {ECO:0000256|HAMAP-Rule:MF_01870, ECO:0000256|SAAS:SAAS00011687}; EC=3.5.1.n3 {ECO:0000256|HAMAP-Rule:MF_01870};; TaxID=54
4-deoxy-4-formamido-L-arabinose-phospho-UDP deformylase
NECEvent2014_6_5_scaffold_214_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15995..17653
DNA (1659bp) protein (553aa)
Undecaprenyl phosphate-alpha-4-amino-4-deoxy-L-arabinose arabinosyl transferase {ECO:0000256|HAMAP-Rule:MF_01165}; EC=2.4.2.43 {ECO:0000256|HAMAP-Rule:MF_01165};; 4-amino-4-deoxy-L-arabinose lipid A t
arnT; 4-amino-4-deoxy-L-arabinose transferase
NECEvent2014_6_5_scaffold_214_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17650..17985
DNA (336bp) protein (112aa)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE {ECO:0000256|HAMAP-Rule:MF_01869, ECO:0000256|SAAS:SAAS00166808}; Short=L-Ara4N-phosphoundecaprenol flippase subunit ArnE
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase
NECEvent2014_6_5_scaffold_214_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17985..18371
DNA (387bp) protein (129aa)
Probable 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF {ECO:0000256|HAMAP-Rule:MF_00538, ECO:0000256|SAAS:SAAS00016708}; Short=L-Ara4N-phosphoundecaprenol flippase subunit ArnF
4-amino-4-deoxy-L-arabinose-phospho-UDP flippase
NECEvent2014_6_5_scaffold_214_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18374..18637)
DNA (264bp) protein (88aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX69639.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
signal transduction protein PmrD
NECEvent2014_6_5_scaffold_214_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18733..20157)
DNA (1425bp) protein (475aa)
2-succinylbenzoate--CoA ligase {ECO:0000256|HAMAP-Rule:MF_00731}; EC=6.2.1.26 {ECO:0000256|HAMAP-Rule:MF_00731};; o-succinylbenzoyl-CoA synthetase {ECO:0000256|HAMAP-Rule:MF_00731}; TaxID=1400136 spec
O-succinylbenzoic acid--CoA ligase (EC:6.2.1.26)
NECEvent2014_6_5_scaffold_214_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20154..21116)
DNA (963bp) protein (321aa)
o-succinylbenzoate synthase {ECO:0000256|HAMAP-Rule:MF_00470, ECO:0000256|SAAS:SAAS00050627}; Short=OSB synthase {ECO:0000256|HAMAP-Rule:MF_00470};; Short=OSBS {ECO:0000256|HAMAP-Rule:MF_00470};; EC=4
O-succinylbenzoate synthase
NECEvent2014_6_5_scaffold_214_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21116..21973)
DNA (858bp) protein (286aa)
1,4-dihydroxy-2-naphthoyl-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934}; Short=DHNA-CoA synthase {ECO:0000256|HAMAP-Rule:MF_01934};; EC=4.1.3.36 {ECO:0000256|HAMAP-Rule:MF_01934};; TaxID=546 species=
dihydroxynaphthoic acid synthetase (EC:4.1.3.36)
NECEvent2014_6_5_scaffold_214_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21988..22746)
DNA (759bp) protein (253aa)
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01660, ECO:0000256|SAAS:SAAS00195264}; Short=SHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01660};; EC=4.2.99.20 {
2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase
NECEvent2014_6_5_scaffold_214_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22743..24413)
DNA (1671bp) protein (557aa)
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase {ECO:0000256|HAMAP-Rule:MF_01659, ECO:0000256|SAAS:SAAS00056887}; Short=SEPHCHC synthase {ECO:0000256|HAMAP-Rule:MF_01659};; EC=
2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate synthase (EC:2.2.1.9)
NECEvent2014_6_5_scaffold_214_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24498..25796)
DNA (1299bp) protein (433aa)
Isochorismate synthase {ECO:0000313|EMBL:KJC09940.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
isochorismate synthase
NECEvent2014_6_5_scaffold_214_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25901..26206)
DNA (306bp) protein (102aa)
Protein elaB {ECO:0000313|EMBL:ETX69646.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
protein ElaB
NECEvent2014_6_5_scaffold_214_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26270..26731)
DNA (462bp) protein (154aa)
Acyltransferase {ECO:0000313|EMBL:KJC05003.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sou
acyltransferase
NECEvent2014_6_5_scaffold_214_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

26799..27716
DNA (918bp) protein (306aa)
Ribonuclease BN {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase BN {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01818};; Ribonuclease Z homolog {ECO:0000256|HAMAP-Rule:MF_0
ribonuclease Z (EC:3.1.26.11)
NECEvent2014_6_5_scaffold_214_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27781..28785
DNA (1005bp) protein (335aa)
Chemotaxis protein CheV {ECO:0000313|EMBL:KJC05005.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
chemotaxis protein CheV
NECEvent2014_6_5_scaffold_214_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(28845..30302)
DNA (1458bp) protein (486aa)
NADH-quinone oxidoreductase subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; EC=1.6.5.11 {ECO:0000256|HAMAP-Rule:MF_00445};; NADH dehydrogenase I subunit N {ECO:0000256|HAMAP-Rule:MF_00445}; NDH-1 subunit
NADH:ubiquinone oxidoreductase subunit N (EC:1.6.99.5)
Displaying items 1-30 of 37 in total

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