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NECEvent2014_6_5_scaffold_222

Alias: 176_005_scaffold_222

Search features with annotation key words

Displaying items 1-30 of 38 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_222_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(48..749)
DNA (702bp) protein (234aa)
Ribonucleoside-diphosphate reductase subunit beta {ECO:0000256|PIRNR:PIRNR000355}; EC=1.17.4.1 {ECO:0000256|PIRNR:PIRNR000355};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enter
ribonucleotide-diphosphate reductase subunit beta (EC:1.17.4.1)
NECEvent2014_6_5_scaffold_222_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(760..2904)
DNA (2145bp) protein (715aa)
Ribonucleoside-diphosphate reductase {ECO:0000256|RuleBase:RU003410}; EC=1.17.4.1 {ECO:0000256|RuleBase:RU003410};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteria
hypothetical protein
NECEvent2014_6_5_scaffold_222_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2877..3287)
DNA (411bp) protein (137aa)
Protein NrdI {ECO:0000256|HAMAP-Rule:MF_00128, ECO:0000256|SAAS:SAAS00020464}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.
nrdI; ribonucleotide reductase stimulatory protein
NECEvent2014_6_5_scaffold_222_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3284..3529)
DNA (246bp) protein (82aa)
Glutaredoxin-like protein NrdH, required for reduction of Ribonucleotide reductase class Ib {ECO:0000313|EMBL:CDL38644.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
glutaredoxin
NECEvent2014_6_5_scaffold_222_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3809..4240)
DNA (432bp) protein (144aa)
Alkyl hydroperoxide reductase AhpD {ECO:0000256|SAAS:SAAS00088523}; EC=1.11.1.15 {ECO:0000256|SAAS:SAAS00088503};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
alkylhydroperoxidase
NECEvent2014_6_5_scaffold_222_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4331..5665
DNA (1335bp) protein (445aa)
Bacterial regulatory s, gntR family protein {ECO:0000313|EMBL:KEL78511.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
DeoR faimly transcriptional regulator
NECEvent2014_6_5_scaffold_222_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5914..6264
DNA (351bp) protein (117aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX61933.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_5_scaffold_222_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6301..6750)
DNA (450bp) protein (150aa)
membrane protein
L-alanine exporter AlaE {ECO:0000256|HAMAP-Rule:MF_00914}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
NECEvent2014_6_5_scaffold_222_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7308..7709
DNA (402bp) protein (134aa)
DNA-binding protein {ECO:0000256|PIRNR:PIRNR002096}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia col
DNA-binding protein
NECEvent2014_6_5_scaffold_222_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7746..7925)
DNA (180bp) protein (60aa)
Uncharacterized protein {ECO:0000313|EMBL:KEL78507.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_6_5_scaffold_222_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8016..8543)
DNA (528bp) protein (176aa)
Inner membrane protein ygaP {ECO:0000313|EMBL:ETX70050.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
membrane protein
NECEvent2014_6_5_scaffold_222_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8553..8852)
DNA (300bp) protein (100aa)
Transcriptional regulator {ECO:0000313|EMBL:ETX61928.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
transcriptional regulator
NECEvent2014_6_5_scaffold_222_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9046..9204
DNA (159bp) protein (53aa)
UPF0057 membrane protein yqaE {ECO:0000313|EMBL:KDF13534.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freun
hypothetical protein
NECEvent2014_6_5_scaffold_222_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9300..9749
DNA (450bp) protein (150aa)
LysM domain/BON superfamily protein {ECO:0000313|EMBL:ETX61926.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
peptidoglycan-binding protein
NECEvent2014_6_5_scaffold_222_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9762..10448)
DNA (687bp) protein (229aa)
Transcriptional regulator {ECO:0000313|EMBL:KJC12928.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
transcriptional regulator
NECEvent2014_6_5_scaffold_222_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10494..11894)
DNA (1401bp) protein (467aa)
Gamma-aminobutyrate transporter {ECO:0000313|EMBL:KJC12927.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundi
gamma-aminobutyrate transporter
NECEvent2014_6_5_scaffold_222_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12037..13320)
DNA (1284bp) protein (428aa)
4-aminobutyrate transaminase {ECO:0000313|EMBL:KEL78500.1}; EC=2.6.1.19 {ECO:0000313|EMBL:KEL78500.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterob
4-aminobutyrate aminotransferase
NECEvent2014_6_5_scaffold_222_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13346..14794)
DNA (1449bp) protein (483aa)
gabD; succinate-semialdehyde dehydrogenase (EC:1.2.1.16)
Succinate-semialdehyde dehydrogenase [NADP+] {ECO:0000313|EMBL:ETX70043.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Ci
NECEvent2014_6_5_scaffold_222_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14818..16086)
DNA (1269bp) protein (423aa)
L-2-hydroxyglutarate oxidase LhgO {ECO:0000256|HAMAP-Rule:MF_00990}; EC=1.1.3.15 {ECO:0000256|HAMAP-Rule:MF_00990};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteri
hydroxyglutarate oxidase
NECEvent2014_6_5_scaffold_222_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16106..17083)
DNA (978bp) protein (326aa)
Protein CsiD {ECO:0000256|HAMAP-Rule:MF_01083}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-1
carbon starvation induced protein
NECEvent2014_6_5_scaffold_222_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17323..18036)
DNA (714bp) protein (238aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX70040.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
transporter
NECEvent2014_6_5_scaffold_222_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18068..19303)
DNA (1236bp) protein (412aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX70039.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
MFS transporter
NECEvent2014_6_5_scaffold_222_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19315..20139)
DNA (825bp) protein (275aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX70038.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
carbon-phosphorus lyase
NECEvent2014_6_5_scaffold_222_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20429..22648
DNA (2220bp) protein (740aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX70037.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
LacI family transcriptional regulator
NECEvent2014_6_5_scaffold_222_25
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22701..23306)
DNA (606bp) protein (202aa)
Short chain dehydrogenase {ECO:0000313|EMBL:CDL38610.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
short-chain dehydrogenase
NECEvent2014_6_5_scaffold_222_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23405..24295
DNA (891bp) protein (297aa)
LysR family transcriptional regulator {ECO:0000313|EMBL:ETX70035.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobact
LysR family transcriptional regulator
NECEvent2014_6_5_scaffold_222_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24366..25880)
DNA (1515bp) protein (505aa)
Tricarboxylic transport membrane protein {ECO:0000313|EMBL:ETX70034.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrob
tripartite tricarboxylate transporter TctA
NECEvent2014_6_5_scaffold_222_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25891..26325)
DNA (435bp) protein (145aa)
Uncharacterized protein {ECO:0000313|EMBL:KDF13519.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
membrane protein
NECEvent2014_6_5_scaffold_222_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26340..27317)
DNA (978bp) protein (326aa)
Tricarboxylate transport protein TctC {ECO:0000313|EMBL:CDL38606.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source=
tricarboxylic transport membrane protein
NECEvent2014_6_5_scaffold_222_30
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

27471..28145
DNA (675bp) protein (225aa)
Response regulator receiver domain protein {ECO:0000313|EMBL:EFE06934.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citro
transcriptional regulator rbh
Displaying items 1-30 of 38 in total

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