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NECEvent2014_6_5_scaffold_296

Alias: 176_005_scaffold_296

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_296_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

29..484
DNA (456bp) protein (152aa)
dksA; RNA polymerase-binding transcription factor
RNA polymerase-binding transcription factor DksA {ECO:0000256|HAMAP-Rule:MF_00926}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter
NECEvent2014_6_5_scaffold_296_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

555..1451
DNA (897bp) protein (299aa)
Glutamyl-Q tRNA(Asp) synthetase {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0000256|SAAS:SAAS00018238}; Short=Glu-Q-RSs {ECO:0000256|HAMAP-Rule:MF_01428};; EC=6.1.1.- {ECO:0000256|HAMAP-Rule:MF_01428, ECO:0
glutamyl-Q tRNA(Asp) ligase (EC:6.1.1.-)
NECEvent2014_6_5_scaffold_296_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1556..2920
DNA (1365bp) protein (455aa)
Poly(A) polymerase I {ECO:0000256|HAMAP-Rule:MF_00957}; Short=PAP I {ECO:0000256|HAMAP-Rule:MF_00957};; EC=2.7.7.19 {ECO:0000256|HAMAP-Rule:MF_00957};; TaxID=1432557 species="Bacteria; Proteobacteria;
pcnB; poly(A) polymerase I (EC:2.7.7.19)
NECEvent2014_6_5_scaffold_296_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2917..3396
DNA (480bp) protein (160aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase {ECO:0000313|EMBL:ETX72202.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_6_5_scaffold_296_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3517..4308
DNA (792bp) protein (264aa)
3-methyl-2-oxobutanoate hydroxymethyltransferase {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725}; EC=2.1.2.11 {ECO:0000256|HAMAP-Rule:MF_00156, ECO:0000256|SAAS:SAAS00094725};; Ketopa
panB; 3-methyl-2-oxobutanoate hydroxymethyltransferase (EC:2.1.2.11)
NECEvent2014_6_5_scaffold_296_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4430..5284
DNA (855bp) protein (285aa)
Pantothenate synthetase {ECO:0000256|HAMAP-Rule:MF_00158}; Short=PS {ECO:0000256|HAMAP-Rule:MF_00158};; EC=6.3.2.1 {ECO:0000256|HAMAP-Rule:MF_00158};; Pantoate--beta-alanine ligase {ECO:0000256|HAMAP-
panC; pantoate--beta-alanine ligase (EC:6.3.2.1)
NECEvent2014_6_5_scaffold_296_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5380..5760
DNA (381bp) protein (127aa)
Aspartate 1-decarboxylase {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097809}; EC=4.1.1.11 {ECO:0000256|HAMAP-Rule:MF_00446, ECO:0000256|SAAS:SAAS00097718};; Aspartate alpha-decarboxylase
panD; aspartate 1-decarboxylase
NECEvent2014_6_5_scaffold_296_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(5767..6996)
DNA (1230bp) protein (410aa)
Polysaccharide deacetylase {ECO:0000313|EMBL:ETX72198.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
hypothetical protein
NECEvent2014_6_5_scaffold_296_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7058..7498)
DNA (441bp) protein (147aa)
PTS system fructose IIA component family protein {ECO:0000313|EMBL:KEL79213.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
PTS sugar transporter subunit IIA
NECEvent2014_6_5_scaffold_296_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(7602..8372)
DNA (771bp) protein (257aa)
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freund
ABC transporter permease
NECEvent2014_6_5_scaffold_296_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8369..9295)
DNA (927bp) protein (309aa)
ABC transporter ATP-binding protein {ECO:0000313|EMBL:ETX72195.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
multidrug ABC transporter ATP-binding protein
NECEvent2014_6_5_scaffold_296_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9343..10065
DNA (723bp) protein (241aa)
Carbonic anhydrase {ECO:0000256|RuleBase:RU003956}; EC=4.2.1.1 {ECO:0000256|RuleBase:RU003956};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteria
carbonic anhydrase (EC:4.2.1.1)
NECEvent2014_6_5_scaffold_296_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10159..10695)
DNA (537bp) protein (179aa)
Hypoxanthine phosphoribosyltransferase {ECO:0000313|EMBL:KJC07503.1}; EC=2.4.2.8 {ECO:0000313|EMBL:KJC07503.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; En
hypoxanthine phosphoribosyltransferase (EC:2.4.2.8)
NECEvent2014_6_5_scaffold_296_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10947..12602)
DNA (1656bp) protein (552aa)
Chemotaxis protein {ECO:0000313|EMBL:KJC13439.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
chemotaxis protein
NECEvent2014_6_5_scaffold_296_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12787..13161)
DNA (375bp) protein (125aa)
Multicopper oxidase {ECO:0000313|EMBL:KJC07505.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
multicopper oxidase
NECEvent2014_6_5_scaffold_296_16
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13130..14398)
DNA (1269bp) protein (423aa)
Blue copper oxidase CueO {ECO:0000313|EMBL:KEL79207.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
multicopper oxidase
NECEvent2014_6_5_scaffold_296_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14513..14899
DNA (387bp) protein (129aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72190.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
yacC; protein YacC
NECEvent2014_6_5_scaffold_296_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14930..15697)
DNA (768bp) protein (256aa)
DeoR-like helix-turn-helix domain protein {ECO:0000313|EMBL:KEL79205.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" sou
DeoR faimly transcriptional regulator
NECEvent2014_6_5_scaffold_296_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15707..16690)
DNA (984bp) protein (328aa)
4-hydroxythreonine-4-phosphate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154}; EC=1.1.1.262 {ECO:0000256|HAMAP-Rule:MF_00536, ECO:0000256|SAAS:SAAS00086154};; 4-(phosph
pdxA; 4-hydroxythreonine-4-phosphate dehydrogenase (EC:1.1.1.262)
NECEvent2014_6_5_scaffold_296_20
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16680..17951)
DNA (1272bp) protein (424aa)
Uncharacterized protein {ECO:0000313|EMBL:KEL79203.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
membrane protein
NECEvent2014_6_5_scaffold_296_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17948..18901)
DNA (954bp) protein (318aa)
2-keto-3-deoxygluconate permease {ECO:0000256|HAMAP-Rule:MF_00070}; Short=KDG permease {ECO:0000256|HAMAP-Rule:MF_00070};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterob
2-keto-3-deoxygluconate permease
NECEvent2014_6_5_scaffold_296_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19083..19445)
DNA (363bp) protein (121aa)
hypothetical protein
UPF0231 protein P835_00583 {ECO:0000256|HAMAP-Rule:MF_01053}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freu
NECEvent2014_6_5_scaffold_296_23
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19620..22217)
DNA (2598bp) protein (866aa)
Aconitate hydratase B {ECO:0000256|PIRNR:PIRNR036687}; EC=4.2.1.3 {ECO:0000256|PIRNR:PIRNR036687};; EC=4.2.1.99 {ECO:0000256|PIRNR:PIRNR036687};; 2-methylisocitrate dehydratase {ECO:0000256|PIRNR:PIRN
acnB; bifunctional aconitate hydratase 2/2-methylisocitrate dehydratase (EC:4.2.1.3)
NECEvent2014_6_5_scaffold_296_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

22666..24270
DNA (1605bp) protein (535aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72187.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein rbh
NECEvent2014_6_5_scaffold_296_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

24281..25075
DNA (795bp) protein (265aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72186.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_5_scaffold_296_26
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25139..25870)
DNA (732bp) protein (244aa)
TraT complement resistance protein {ECO:0000313|EMBL:ETX72185.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
conjugal transfer protein TraT
NECEvent2014_6_5_scaffold_296_27
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26065..27489)
DNA (1425bp) protein (475aa)
dihydrolipoamide dehydrogenase (EC:1.8.1.4)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=766154 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Entero
NECEvent2014_6_5_scaffold_296_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(27664..29505)
DNA (1842bp) protein (614aa)
Acetyltransferase component of pyruvate dehydrogenase complex {ECO:0000256|RuleBase:RU361137}; EC=2.3.1.12 {ECO:0000256|RuleBase:RU361137};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobac
aceF; pyruvate dehydrogenase dihydrolipoyltransacetylase (EC:2.3.1.12)
Displaying 28 items

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