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NECEvent2014_6_5_scaffold_460

Alias: 176_005_scaffold_460

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Displaying 19 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_460_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3..1799
DNA (1797bp) protein (599aa)
Outer membrane autotransporter barrel domain protein {ECO:0000313|EMBL:KEL78273.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escheri
outer membrane autotransporter barrel domain protein
NECEvent2014_6_5_scaffold_460_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1884..2165)
DNA (282bp) protein (94aa)
Membrane protein {ECO:0000313|EMBL:KJC06474.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
membrane protein
NECEvent2014_6_5_scaffold_460_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2718..4304
DNA (1587bp) protein (529aa)
Signal peptide protein {ECO:0000313|EMBL:KJC01104.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
signal peptide protein
NECEvent2014_6_5_scaffold_460_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4307..4630)
DNA (324bp) protein (108aa)
Regulatory protein soxS {ECO:0000313|EMBL:ETX66027.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
transcriptional regulator
NECEvent2014_6_5_scaffold_460_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4717..5175
DNA (459bp) protein (153aa)
Redox-sensitive transcriptional activator soxR {ECO:0000313|EMBL:ETX71743.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter;
transcriptional regulator
NECEvent2014_6_5_scaffold_460_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5775..7124
DNA (1350bp) protein (450aa)
Major facilitator superfamily transporter, AGZA family, xanthine/uracil permease {ECO:0000313|EMBL:ETX71744.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales;
permase
NECEvent2014_6_5_scaffold_460_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7282..8928
DNA (1647bp) protein (549aa)
Sodium:proton antiporter {ECO:0000313|EMBL:KJC06469.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii compl
sodium:proton antiporter
NECEvent2014_6_5_scaffold_460_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9149..9640
DNA (492bp) protein (164aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC01099.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_5_scaffold_460_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9711..10601)
DNA (891bp) protein (297aa)
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL78266.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
transcriptional regulator
NECEvent2014_6_5_scaffold_460_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10703..11113
DNA (411bp) protein (137aa)
Holin-like protein {ECO:0000313|EMBL:ETX71747.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
LrgA
NECEvent2014_6_5_scaffold_460_11
Citrobacter youngae, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11106..11795
DNA (690bp) protein (230aa)
Putative TIGR00659 family protein {ECO:0000313|EMBL:EFE05485.1}; TaxID=500640 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fr
LrgB
NECEvent2014_6_5_scaffold_460_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11841..13490)
DNA (1650bp) protein (550aa)
Cation/acetate symporter ActP {ECO:0000256|HAMAP-Rule:MF_01426, ECO:0000256|SAAS:SAAS00025334}; Acetate permease {ECO:0000256|HAMAP-Rule:MF_01426}; Acetate transporter ActP {ECO:0000256|HAMAP-Rule:MF_
actP; acetate permease
NECEvent2014_6_5_scaffold_460_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13487..13801)
DNA (315bp) protein (105aa)
Membrane protein {ECO:0000313|EMBL:KJC06478.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
membrane protein
NECEvent2014_6_5_scaffold_460_14
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14038..15996)
DNA (1959bp) protein (653aa)
Acetyl-coenzyme A synthetase {ECO:0000256|HAMAP-Rule:MF_01123}; Short=AcCoA synthetase {ECO:0000256|HAMAP-Rule:MF_01123};; Short=Acs {ECO:0000256|HAMAP-Rule:MF_01123};; EC=6.2.1.1 {ECO:0000256|HAMAP-R
acetyl-CoA synthetase (EC:6.2.1.1)
NECEvent2014_6_5_scaffold_460_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16430..17866
DNA (1437bp) protein (479aa)
Cytochrome c-552 {ECO:0000256|HAMAP-Rule:MF_01182, ECO:0000256|SAAS:SAAS00233541}; EC=1.7.2.2 {ECO:0000256|HAMAP-Rule:MF_01182, ECO:0000256|SAAS:SAAS00233490};; Ammonia-forming cytochrome c nitrite re
nrfA; cytochrome C nitrite reductase (EC:1.7.2.2)
NECEvent2014_6_5_scaffold_460_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17911..18477
DNA (567bp) protein (189aa)
Cytochrome C nitrite reductase {ECO:0000313|EMBL:KJC06462.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
cytochrome C nitrite reductase
NECEvent2014_6_5_scaffold_460_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

18474..19145
DNA (672bp) protein (224aa)
Cytochrome c nitrite reductase, Fe-S protein {ECO:0000313|EMBL:KEL78258.1}; EC=1.7.2.2 {ECO:0000313|EMBL:KEL78258.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacte
nitrite reductase rbh
NECEvent2014_6_5_scaffold_460_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19142..20098
DNA (957bp) protein (319aa)
Nitrite reductase {ECO:0000313|EMBL:KJC01089.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" s
nitrite reductase
NECEvent2014_6_5_scaffold_460_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20167..21507
DNA (1341bp) protein (447aa)
Heme lyase {ECO:0000313|EMBL:KJC06459.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="
heme lyase subunit NrfE
Displaying 19 items

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