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NECEvent2014_6_5_scaffold_530

Alias: 176_005_scaffold_530

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Displaying 23 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_530_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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20..712
DNA (693bp) protein (231aa)
colicin uptake protein TolQ
Protein tolQ {ECO:0000313|EMBL:KDF21134.1}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
NECEvent2014_6_5_scaffold_530_2
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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716..1144
DNA (429bp) protein (143aa)
colicin uptake protein TolR
Colicin uptake protein TolR {ECO:0000313|EMBL:KKC62231.1}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter
NECEvent2014_6_5_scaffold_530_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1209..2465
DNA (1257bp) protein (419aa)
Protein tolA {ECO:0000313|EMBL:ETX72802.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
tolA; membrane protein
NECEvent2014_6_5_scaffold_530_4
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2594..3886
DNA (1293bp) protein (431aa)
Protein TolB {ECO:0000256|HAMAP-Rule:MF_00671}; Flags: Precursor;; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="C
tolB; translocation protein TolB rbh
NECEvent2014_6_5_scaffold_530_5
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3921..4439
DNA (519bp) protein (173aa)
peptidoglycan-associated outer membrane lipoprotein
Peptidoglycan-associated lipoprotein {ECO:0000313|EMBL:EOQ50383.1}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="
NECEvent2014_6_5_scaffold_530_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4449..5240
DNA (792bp) protein (264aa)
Tol-pal system protein YbgF {ECO:0000313|EMBL:KEL77492.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherich
tol-pal system protein
NECEvent2014_6_5_scaffold_530_trna_1
unknown

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5406..5478
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_530_trna_2
unknown

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5518..5590
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_530_trna_3
unknown

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5597..5669
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_530_trna_4
unknown

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5718..5790
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_530_trna_5
unknown

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5927..5999
DNA (73bp)
transferRNA
NECEvent2014_6_5_scaffold_530_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6440..7483
DNA (1044bp) protein (348aa)
Quinolinate synthase A {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00012209}; EC=2.5.1.72 {ECO:0000256|HAMAP-Rule:MF_00567, ECO:0000256|SAAS:SAAS00096027};; TaxID=546 species="Bacteria; Pro
quinolinate synthetase
NECEvent2014_6_5_scaffold_530_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7510..8229
DNA (720bp) protein (240aa)
Nicotinamide riboside transporter PnuC {ECO:0000313|EMBL:KJC08336.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter
nicotinamide riboside transporter PnuC
NECEvent2014_6_5_scaffold_530_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8226..9167)
DNA (942bp) protein (314aa)
Zinc transporter ZitB {ECO:0000256|HAMAP-Rule:MF_00552}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
zinc transporter ZitB
NECEvent2014_6_5_scaffold_530_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9281..9655)
DNA (375bp) protein (125aa)
Homeobox protein {ECO:0000313|EMBL:ETX64013.1}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;
hypothetical protein
NECEvent2014_6_5_scaffold_530_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9973..11025
DNA (1053bp) protein (351aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR
phospho-2-dehydro-3-deoxyheptonate aldolase (EC:2.5.1.54)
NECEvent2014_6_5_scaffold_530_12
Shigella flexneri, Shigella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(11133..11885)
DNA (753bp) protein (251aa)
2,3-bisphosphoglycerate-dependent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01039, ECO:0000256|RuleBase:RU004512}; Short=BPG-dependent PGAM {ECO:0000256|HAMAP-Rule:MF_01039};; Short=PGAM {ECO
gpmA; phosphoglyceromutase
NECEvent2014_6_5_scaffold_530_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12118..13158)
DNA (1041bp) protein (347aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=546 species="Bacteria; Proteobacteria; Gamm
galM; galactose-1-epimerase (EC:5.1.3.3)
NECEvent2014_6_5_scaffold_530_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13152..14300)
DNA (1149bp) protein (383aa)
Galactokinase {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00025843}; EC=2.7.1.6 {ECO:0000256|HAMAP-Rule:MF_00246, ECO:0000256|SAAS:SAAS00015833};; Galactose kinase {ECO:0000256|HAMAP-Rule:M
galactokinase (EC:2.7.1.6)
NECEvent2014_6_5_scaffold_530_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14304..15350)
DNA (1047bp) protein (349aa)
Galactose-1-phosphate uridylyltransferase {ECO:0000256|RuleBase:RU000506}; EC=2.7.7.12 {ECO:0000256|RuleBase:RU000506};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobac
galactose-1-phosphate uridylyltransferase (EC:2.7.7.12)
NECEvent2014_6_5_scaffold_530_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15360..16376)
DNA (1017bp) protein (339aa)
UDP-galactose-4-epimerase {ECO:0000313|EMBL:KJC08328.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
UDP-galactose-4-epimerase
NECEvent2014_6_5_scaffold_530_17
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16593..18065)
DNA (1473bp) protein (491aa)
Molybdenum transport ATP-binding protein ModF {ECO:0000313|EMBL:ETX72817.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; C
molybdenum ABC transporter ATP-binding protein
NECEvent2014_6_5_scaffold_530_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18133..18660)
DNA (528bp) protein (176aa)
Transcriptional regulator modE {ECO:0000313|EMBL:KEL77441.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escher
transcriptional regulator
Displaying 23 items

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