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NECEvent2014_6_5_scaffold_65_21

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(22879..23772)

Top 3 Functional Annotations

Value Algorithm Source
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:KEL80577.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 297.0
  • Bit_score: 571
  • Evalue 7.50e-160
hypothetical protein similarity KEGG
DB: KEGG
  • Identity: 96.6
  • Coverage: 297.0
  • Bit_score: 559
  • Evalue 7.80e-157

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 894
ATGCTGACGGCGAAAAAAGCCAAAAACCGTATTGATGTCTATGGTGACCGTTTTCGCGCCCGGGCGCATTTACTCTCGCCACGTATGCAGGCCGTGGCGCGTTATATCAACGAAAACCGCGAAGTGGTGCTGGAGTTTACAGCGATAGAAATCGCTGCCGCCACGCAAACATCTGACGCGACGGTGGTCAGGGCAATTCAGGCGCTGGGGTTTGCCGGGTTGCGCGATTTAAAGCAGACCATTGAACACTGGTTTGGCCCTGGCGTGACCTCAGAAGAGAAGATGACCACCACGGTGAATACGCTCTCTTGCGATGTTAATTCCAGTATTGATTTTGTCTTGCAGGGGCATCAGCGTACCTGTGAAGCGCTTTCTACACCGCAAAACCGCTATGCAATTGCCCAGGCGGTGGCATTACTGGTAGAAGCCCGTCAGGTGGGAATTTTTGGTATTGGCGCATCCGGCGTATTGGCGGATTATACCGTTCGTCTGCTCAGCCGTATTGGCCTGCCTGCGGTAGCATTTAATCGCACCGGGATTAACCTCGCGGAGCAACTGATCGCATTGCAGCGTGGAGATGTGCTGATCATGATGGCGCAGAAATCTCCGCACCGGGAAGGGCTGACGACCATTCGCGAGGCCAGGCGGTTGGGTGTCCCGGTTATTTTACTGACGAACGCGCTGGACTCCCGTTTTAGTAAAGAAGCGGATGTGGTGATTAACGTGCCGCGCGGCGGCGAGAATGGGAAAATGCCGCTCCACGGTACGGTGCTGGTGTGTCTGGAAATGATTGTGCTGTCTGTCGCTTCCACTGCGCCGCAGCGATCAATTAAATCCGTGAAGCGGATTAACGAACTGTATCGGGGCATTGGTAAATCCGGGGCGAAGAAATAA
PROTEIN sequence
Length: 298
MLTAKKAKNRIDVYGDRFRARAHLLSPRMQAVARYINENREVVLEFTAIEIAAATQTSDATVVRAIQALGFAGLRDLKQTIEHWFGPGVTSEEKMTTTVNTLSCDVNSSIDFVLQGHQRTCEALSTPQNRYAIAQAVALLVEARQVGIFGIGASGVLADYTVRLLSRIGLPAVAFNRTGINLAEQLIALQRGDVLIMMAQKSPHREGLTTIREARRLGVPVILLTNALDSRFSKEADVVINVPRGGENGKMPLHGTVLVCLEMIVLSVASTAPQRSIKSVKRINELYRGIGKSGAKK*