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NECEvent2014_6_5_scaffold_65

Alias: 176_005_scaffold_65

Search features with annotation key words

Displaying items 1-30 of 63 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_65_1
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3..476)
DNA (474bp) protein (158aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72425.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_5_scaffold_65_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

895..1236
DNA (342bp) protein (114aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72424.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
hypothetical protein
NECEvent2014_6_5_scaffold_65_3
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1373..1849)
DNA (477bp) protein (159aa)
Cold-shock protein {ECO:0000313|EMBL:ETX72423.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex
cold-shock protein
NECEvent2014_6_5_scaffold_65_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1936..2181)
DNA (246bp) protein (82aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC04634.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_5_scaffold_65_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

2559..3335
DNA (777bp) protein (259aa)
Uncharacterized protein {ECO:0000313|EMBL:KEL80558.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_6_5_scaffold_65_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3354..4304
DNA (951bp) protein (317aa)
Transcriptional regulator {ECO:0000313|EMBL:ETX72420.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
AraC family transcriptional regulator
NECEvent2014_6_5_scaffold_65_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4301..5038)
DNA (738bp) protein (246aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72419.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
methyltransferase
NECEvent2014_6_5_scaffold_65_8
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5074..6156
DNA (1083bp) protein (361aa)
Lac repressor {ECO:0000313|EMBL:KJC13084.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" sourc
lacI; lac repressor
NECEvent2014_6_5_scaffold_65_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

6278..9361
DNA (3084bp) protein (1028aa)
Beta-galactosidase {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:SAAS00046613}; Short=Beta-gal {ECO:0000256|HAMAP-Rule:MF_01687};; EC=3.2.1.23 {ECO:0000256|HAMAP-Rule:MF_01687, ECO:0000256|SAAS:S
lacZ; beta-D-galactosidase (EC:3.2.1.23)
NECEvent2014_6_5_scaffold_65_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9413..10666
DNA (1254bp) protein (418aa)
Lactose permease {ECO:0000313|EMBL:ETX72416.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;
lacY; galactoside permease
NECEvent2014_6_5_scaffold_65_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

10695..11306
DNA (612bp) protein (204aa)
Galactoside O-acetyltransferase {ECO:0000313|EMBL:KJC13081.1}; EC=2.3.1.18 {ECO:0000313|EMBL:KJC13081.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
lacA; galactoside O-acetyltransferase (EC:2.3.1.18)
NECEvent2014_6_5_scaffold_65_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11397..13283)
DNA (1887bp) protein (629aa)
prpE; propionyl-CoA synthetase (EC:6.2.1.17)
Propionate-CoA ligase {ECO:0000313|EMBL:ETX72414.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comp
NECEvent2014_6_5_scaffold_65_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13324..14775)
DNA (1452bp) protein (484aa)
2-methylcitrate dehydratase {ECO:0000313|EMBL:KJC04625.1}; EC=4.2.1.79 {ECO:0000313|EMBL:KJC04625.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
prpD; 2-methylcitrate dehydratase (EC:4.2.1.79)
NECEvent2014_6_5_scaffold_65_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14816..15985)
DNA (1170bp) protein (390aa)
methylcitrate synthase (EC:2.3.3.5)
Citrate synthase {ECO:0000256|PIRNR:PIRNR001369}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli I
NECEvent2014_6_5_scaffold_65_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16066..16947)
DNA (882bp) protein (294aa)
Methylisocitrate lyase {ECO:0000256|RuleBase:RU361121}; EC=4.1.3.30 {ECO:0000256|RuleBase:RU361121};; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobac
prpB; 2-methylisocitrate lyase (EC:4.1.3.30) rbh
NECEvent2014_6_5_scaffold_65_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17200..18810
DNA (1611bp) protein (537aa)
Propionate catabolism operon regulatory protein PrpR {ECO:0000313|EMBL:KJC04622.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter
propionate catabolism operon regulatory protein PrpR
NECEvent2014_6_5_scaffold_65_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18843..19118)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KEL80572.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
hypothetical protein
NECEvent2014_6_5_scaffold_65_18
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

19388..20020
DNA (633bp) protein (211aa)
Neutral amino-acid efflux system protein {ECO:0000313|EMBL:ETX72408.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrob
membrane protein
NECEvent2014_6_5_scaffold_65_19
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

20100..21488
DNA (1389bp) protein (463aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72407.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
diguanylate cyclase
NECEvent2014_6_5_scaffold_65_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21708..22805
DNA (1098bp) protein (366aa)
4Fe-4S membrane protein {ECO:0000313|EMBL:ETX72406.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
electron transporter YccM
NECEvent2014_6_5_scaffold_65_21
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22879..23772)
DNA (894bp) protein (298aa)
Helix-turn-helix domain, rpiR family protein {ECO:0000313|EMBL:KEL80577.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;"
hypothetical protein
NECEvent2014_6_5_scaffold_65_22
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23775..24722)
DNA (948bp) protein (316aa)
Iron complex transport system substrate-binding protein {ECO:0000313|EMBL:ETX72404.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citr
hypothetical protein
NECEvent2014_6_5_scaffold_65_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24738..25790)
DNA (1053bp) protein (351aa)
Putative permease of ferrichrome ABC transporter {ECO:0000313|EMBL:CDL40522.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia
hypothetical protein
NECEvent2014_6_5_scaffold_65_24
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25787..26800)
DNA (1014bp) protein (338aa)
Iron complex transport system permease {ECO:0000313|EMBL:ETX72402.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobac
hypothetical protein
NECEvent2014_6_5_scaffold_65_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(26797..27624)
DNA (828bp) protein (276aa)
Iron complex transport system ATP-binding protein {ECO:0000313|EMBL:ETX72401.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacte
hypothetical protein
NECEvent2014_6_5_scaffold_65_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

28071..30233
DNA (2163bp) protein (721aa)
Ferrichrome-iron receptor {ECO:0000313|EMBL:CDL40875.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia
hypothetical protein
NECEvent2014_6_5_scaffold_65_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

30372..30920
DNA (549bp) protein (183aa)
Uncharacterized protein {ECO:0000313|EMBL:KJC04617.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii comple
hypothetical protein
NECEvent2014_6_5_scaffold_65_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(31020..33110)
DNA (2091bp) protein (697aa)
Ferrioxamine B receptor {ECO:0000313|EMBL:ETX72398.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
ferrioxamine B receptor
NECEvent2014_6_5_scaffold_65_29
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(33250..34233)
DNA (984bp) protein (328aa)
AraC family transcriptional regulator {ECO:0000313|EMBL:KJC13063.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter f
AraC family transcriptional regulator
NECEvent2014_6_5_scaffold_65_30
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(34358..35263)
DNA (906bp) protein (302aa)
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL80586.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
transcriptional regulator
Displaying items 1-30 of 63 in total

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