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NECEvent2014_6_5_scaffold_65_30

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(34358..35263)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory helix-turn-helix , lysR family protein {ECO:0000313|EMBL:KEL80586.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; similarity UNIPROT
DB: UniProtKB
  • Identity: 99.3
  • Coverage: 301.0
  • Bit_score: 604
  • Evalue 6.20e-170
transcriptional regulator similarity KEGG
DB: KEGG
  • Identity: 69.1
  • Coverage: 301.0
  • Bit_score: 431
  • Evalue 1.50e-118

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 906
ATGACGCTACCTCCGTTGTATGCCCTGAGGGCTTTTGAAGCCGCAGCCCGTCTGGGATCGTTCAGCAAAGCCGCTATTCAACTTAACGTGACGGCGGGCGCGGTAAGCCGTCATATTCGCACGCTGGAGGCATGGTTTGGCTGTGAGCTATTTATCCGCAGCGGCCCGCGTATCGAGATAACACCTTCTGGCCAAGGGTTAGCGCAGCAGTTGACGGCTGGGTTTCAGAGTCTGGAACACGCGTGTCATGCCTTTCGCAGCAGCAGTCATGAGCTACGGCTGAAAGCGCCGTCTACGTTGACAATGCGCTGGCTTCTGGATGTGCTGCGTCTTTTCCGTGAAGCGCATCCGACCCCGGTGATCGAAATTTCCAGCGTCTGGATGGATACCGATTCGGTATCCTTCAGTCGTGAACCGTATGATTGTGCGATCCTGTTAGGGAATGGCCATTTTGGTGACGATACCGACAGCCGGTTGCTGTTTCAGGAGTGGCTTATCCCAGTGTGTTCACCCGCACTGCTGGTGCAGGCGCAGCGCGATCTTTCTGCCTGTGAACTGATTCATCCCTCAGCGGATCGCCGCGACTGGCGTCGGTGGCTGCAACGCACTGGGAAGTTTCCGGCGTTGAATCTTGCGCGAGGCAAAGTGTTCGACACCCTGGAGCAGGGTAGTCTTGCCGCGATGAGTGGTCATGGCGTGTCTGTTGCCGACCTGCTGCTAAGCCTGGCGGCCATTCAGGCAGGGATGTTGGCGTTACCGTTTAAAGATGCTGTGGCGACTGGCGAGGGGTATTACCTTGTCTGGCCAAAGGCTTCAACACGGCTCAGAAATATTGAGCTGCTGTATCGCTGGTTAAAAGAGGCTGCGCCGTGTGCCTCCTCGGCAGATCTAAACTGGCTGGATTAA
PROTEIN sequence
Length: 302
MTLPPLYALRAFEAAARLGSFSKAAIQLNVTAGAVSRHIRTLEAWFGCELFIRSGPRIEITPSGQGLAQQLTAGFQSLEHACHAFRSSSHELRLKAPSTLTMRWLLDVLRLFREAHPTPVIEISSVWMDTDSVSFSREPYDCAILLGNGHFGDDTDSRLLFQEWLIPVCSPALLVQAQRDLSACELIHPSADRRDWRRWLQRTGKFPALNLARGKVFDTLEQGSLAAMSGHGVSVADLLLSLAAIQAGMLALPFKDAVATGEGYYLVWPKASTRLRNIELLYRWLKEAAPCASSADLNWLD*