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NECEvent2014_6_5_scaffold_531_5

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: 1996..4617

Top 3 Functional Annotations

Value Algorithm Source
Outer membrane usher protein fimD {ECO:0000313|EMBL:ETX72608.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter f similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 873.0
  • Bit_score: 1782
  • Evalue 0.0
fimbrial protein similarity KEGG
DB: KEGG
  • Identity: 96.7
  • Coverage: 873.0
  • Bit_score: 1737
  • Evalue 0.0

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Taxonomy

Citrobacter freundii → Citrobacter → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 2622
ATGAATAAGACAACGTATTTTCCTGGCCTGTTTCCGGGGGTTACGCCACCGCTGGCGGGGGTGGCGTTGTCCACGCTGGCGGCGCTCTTTCCCTCTTTAAGCCATGGTGAAAGCTATTTTAATCCGGCCTTTTTATCTGCGGATACGGCAACCGTGGCGGATTTATCACGTTTTGAAAAAGGTAATCACCAGCCTGAAGGTGTTTATCGCGTGGATATCTGGCGCAACGATGAGTTTGTGGCTACTCAGGATATTCGTTTTACGACCAGCGCGGGAAAAGCCGGGGAGAAGTCCGGTGGGCTGATGCCGTGCTTTGGGCTCGACTGGGTAAAGCGCCTTGGTGTCAATATCGCCGCGTTTCCGGCACTCAATAAGGATGCGAACGATACCTGCATCAATCTACCTGAGGCGATTCCAGGCAGCGAGATTGCGTTTGATTTTTCTACCCTGCGACTAAACGTCAGCCTGCCGCAGGCGTCGATGTTAAACAGCGCGCGTGGCTATATTCCACCGGAAGAGTGGGATGAAGGCATCCCGGCCGCGCTGGTTAACTACAGTTTCACCGGCAGTCGCGGGAGTGATACGGACAGCTATTTCTTAAGTATGCTCAGTGGCCTGAACTATGGCCCCTGGCGCTTGAGAAATAACGGCGCATGGAGCTATTCCAAAGGTGACGGATATCACTCACAAAGCTGGAAAAACATCGGCACATGGCTTCAGCGCGCGATTATCCCGCTGAAGGGCGAGCTGGTGATGGGTGACAGCAACACCGGCAACGACGTTTTTGACAGCGTCGGATTTCGCGGGGCGCGGCTCTATTCCTCAGACAGTATGTATCCCGATAGCTTACAGGGTTACGCGCCTACCGTTCGCGGTATTGCGCGAACAGCGGCAAAGCTAACCATTCGTCAGAATGGCTATGTGATTTATCAAAGCTATGTTTCACCGGGCGCTTTCTCGATAACCGATCTCAACCCGACGTCATCCAGCGGTGACCTTGAGGTGACGGTGGACGAAAAGGACGGCAGCCAACAGCGCTATACGGTGCCGTACTCCACGGTTCCCTTGTTACAACGAGAAGGGCGTTTCAAATATGACGTGGTCGCAGGGGATTTTCGCAGCGGCAATAGCCAACAATCTTCTCCATTCTTTTTCCAGGGAACATTAATTGCTGGGTTACCAGAAGGCTACACCGCTTACGGCGGTACGCAGTTGGCCTCCCGCTACACGGCGGTGGTTTTAGGCACCGGCCGAAACCTGGGGGACTGGGGGGCGGTTTCTGTCGATCTGACCCATGCCCGCAGCCAACTGGCGGATGACAGTACGCATCAGGGACAGTCATTGCGTTTTCTATATGCGAAATCGCTGAACAATTTTGGCACCAACTTTCAGTTGTTGGGATATCGCTACTCTACGCGTGGTTTCTATACCCTCGACGATGTGGCGTATCGCAGTATGGAAGGCTATGAGTACGAATACGACAGCGAGGGCAATCGCCACGATGTGCCCGATGTGAAGAGTTACCACAACCTGAGCTACAGCAAAAAGGGCCGTTTCCAGATAAACATTTCGCAGAATCTGGGGGATTACGGATCGCTGTATGTCTCGGGTAGTCAGCAAACGTACTGGAATACCTCAGACACCAATACCTGGTATCAACTGGGCTATGCCAGCGGCTGGCAAGGTATTAGCTATTCACTCTCCTGGTCGTGGAATGAATCGGTTGGCATCTCCGACACCGACCGTATTGTCGCGTTCAATATGTCAATACCGTTCAGCCTGCTGAGCGGACGGCGCTACTCGCGAGATAGCGCCTTCGATCGCACCTACGCCACCTTTAATGCTAACCGTAATAGCAATGGACAAAACAGCTGGCAGAGCGGGATCGGCGGTACGTTGCTGGATGGACGCAACCTGAGCTACAGCGTGAATCAGGGGCACAGCAGCACCAATGGCTACAGCGGAAACGCCAGTGCCAACTGGCAGGCGGCCTATGGCACGCTGGGCGTGGGATACAACTACGATCGCGATCAGCATGACTACAACTGGCAACTCTCTGGCGGCGTGGTAGGGCATGCGGATGGCATTACGCTCAGTCAGCCTCTGGGTGATACCAACGTGCTGATTAAAGCGCCTGGCGCACAGGGTGTGCGGATAGAAAACCAGACCGGCGTTCAAACCGACTGGCGTGGATACGCGGTGATGCCGTATGCCACCGTCTATCGCTATAACCGCGTCGCGTTAGACACCAATTCCATGAACAACAATACCGATGTGGAAAATAACGTCAGCAGCGTAGTACCAACGCAAGGGGCGCTGGTGCGAGCGGCGTTTGATACACGAATCGGTGTGCGGGCGCTGATTACCGCCAAATATGCCGGTAAACCCGTGCCGTTTGGCTCTATTGTGCGGGAAAACACCAGCGGCGTGACCAGTATGGTGGGCGAAGACGGGCAAATTTATCTCAGTGGTCTGCCGCTAAAAGGCGAGTTGCTGATCCAATGGGGGGAAGGCGCAAACGCTCGCTGCGTGGCGCGCTATGCCTTGCCTGAGGAGAGTCTGAAACAGGCGGTGACGCTCACGAACGTGACGTGCGAATCTCCAACGGCACGACAGGAATAA
PROTEIN sequence
Length: 874
MNKTTYFPGLFPGVTPPLAGVALSTLAALFPSLSHGESYFNPAFLSADTATVADLSRFEKGNHQPEGVYRVDIWRNDEFVATQDIRFTTSAGKAGEKSGGLMPCFGLDWVKRLGVNIAAFPALNKDANDTCINLPEAIPGSEIAFDFSTLRLNVSLPQASMLNSARGYIPPEEWDEGIPAALVNYSFTGSRGSDTDSYFLSMLSGLNYGPWRLRNNGAWSYSKGDGYHSQSWKNIGTWLQRAIIPLKGELVMGDSNTGNDVFDSVGFRGARLYSSDSMYPDSLQGYAPTVRGIARTAAKLTIRQNGYVIYQSYVSPGAFSITDLNPTSSSGDLEVTVDEKDGSQQRYTVPYSTVPLLQREGRFKYDVVAGDFRSGNSQQSSPFFFQGTLIAGLPEGYTAYGGTQLASRYTAVVLGTGRNLGDWGAVSVDLTHARSQLADDSTHQGQSLRFLYAKSLNNFGTNFQLLGYRYSTRGFYTLDDVAYRSMEGYEYEYDSEGNRHDVPDVKSYHNLSYSKKGRFQINISQNLGDYGSLYVSGSQQTYWNTSDTNTWYQLGYASGWQGISYSLSWSWNESVGISDTDRIVAFNMSIPFSLLSGRRYSRDSAFDRTYATFNANRNSNGQNSWQSGIGGTLLDGRNLSYSVNQGHSSTNGYSGNASANWQAAYGTLGVGYNYDRDQHDYNWQLSGGVVGHADGITLSQPLGDTNVLIKAPGAQGVRIENQTGVQTDWRGYAVMPYATVYRYNRVALDTNSMNNNTDVENNVSSVVPTQGALVRAAFDTRIGVRALITAKYAGKPVPFGSIVRENTSGVTSMVGEDGQIYLSGLPLKGELLIQWGEGANARCVARYALPEESLKQAVTLTNVTCESPTARQE*