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NECEvent2014_6_5_scaffold_531

Alias: 176_005_scaffold_531

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Displaying 18 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_531_1
unknown

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1..99
DNA (99bp) protein (33aa)

This feature has no annotations

NECEvent2014_6_5_scaffold_531_2
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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89..643
DNA (555bp) protein (185aa)
Fimbriae-like adhesin SfmA {ECO:0000313|EMBL:CDL37877.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichi
fimA; type-1 fimbrial protein subunit A
NECEvent2014_6_5_scaffold_531_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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721..1254
DNA (534bp) protein (178aa)
Fimbrial family protein {ECO:0000313|EMBL:KEL80351.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia c
fimbrial protein FimI
NECEvent2014_6_5_scaffold_531_4
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1296..1988
DNA (693bp) protein (231aa)
Chaperone fimC {ECO:0000313|EMBL:ETX72607.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;"
fimbrial chaperone protein FimC
NECEvent2014_6_5_scaffold_531_5
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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1996..4617
DNA (2622bp) protein (874aa)
Outer membrane usher protein fimD {ECO:0000313|EMBL:ETX72608.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter f
fimbrial protein
NECEvent2014_6_5_scaffold_531_6
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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4622..5629
DNA (1008bp) protein (336aa)
Protein fimH {ECO:0000313|EMBL:ETX72609.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" so
fimH; adhesin
NECEvent2014_6_5_scaffold_531_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5622..6158
DNA (537bp) protein (179aa)
Fimbrial-like protein fimF {ECO:0000313|EMBL:ETX72610.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii
fimF; adhesin
NECEvent2014_6_5_scaffold_531_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(6208..6840)
DNA (633bp) protein (211aa)
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KEL80346.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s
fimbriae Z protein
NECEvent2014_6_5_scaffold_531_9
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(7428..8150)
DNA (723bp) protein (241aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72612.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
fimbriae Y protein
NECEvent2014_6_5_scaffold_531_10
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(8536..9129)
DNA (594bp) protein (198aa)
Uncharacterized protein {ECO:0000313|EMBL:ETX72613.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
fimbriae regulatory protein FimW
NECEvent2014_6_5_scaffold_531_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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9164..9310
DNA (147bp) protein (49aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ETX72614.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii co
NECEvent2014_6_5_scaffold_531_trna_1
unknown

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9383..9456
DNA (74bp)
transferRNA
NECEvent2014_6_5_scaffold_531_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(9497..12217)
DNA (2721bp) protein (907aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae;
torS; hybrid sensory histidine kinase TorS
NECEvent2014_6_5_scaffold_531_13
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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12345..13376
DNA (1032bp) protein (344aa)
Periplasmic protein torT {ECO:0000313|EMBL:ETX72616.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii c
torT; periplasmic sensory protein TorT
NECEvent2014_6_5_scaffold_531_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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comp(13349..14041)
DNA (693bp) protein (231aa)
TorCAD operon transcriptional regulatory protein torR {ECO:0000313|EMBL:KEL80339.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escher
torR; DNA-binding transcriptional regulator TorR
NECEvent2014_6_5_scaffold_531_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

14173..15351
DNA (1179bp) protein (393aa)
Trimethylamine N-oxide reductase cytochrome c-type subunit {ECO:0000313|EMBL:KJC13282.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citro
trimethylamine N-oxide reductase cytochrome c-type subunit
NECEvent2014_6_5_scaffold_531_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

15341..17881
DNA (2541bp) protein (847aa)
torA; trimethylamine-N-oxide reductase TorA (EC:1.7.2.3)
Trimethylamine-N-oxide reductase {ECO:0000313|EMBL:ETX72619.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter fr
NECEvent2014_6_5_scaffold_531_17
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

17878..18492
DNA (615bp) protein (205aa)
Chaperone protein TorD {ECO:0000256|HAMAP-Rule:MF_01150, ECO:0000256|SAAS:SAAS00014573}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Es
torD; chaperone protein TorD
Displaying 18 items

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