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NECEvent2014_6_5_scaffold_531_8

Organism: NECEvent2014_6_5_Citrobacter_freundii-rel_52_24_partial

partial RP 18 / 55 MC: 3 BSCG 19 / 51 ASCG 9 / 38 MC: 2
Location: comp(6208..6840)

Top 3 Functional Annotations

Value Algorithm Source
Bacterial regulatory s, luxR family protein {ECO:0000313|EMBL:KEL80346.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" s similarity UNIPROT
DB: UniProtKB
  • Identity: 100.0
  • Coverage: 210.0
  • Bit_score: 406
  • Evalue 3.00e-110
fimbriae Z protein similarity KEGG
DB: KEGG
  • Identity: 98.1
  • Coverage: 210.0
  • Bit_score: 400
  • Evalue 3.30e-109

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Taxonomy

Escherichia coli → Escherichia → Enterobacteriales → Gammaproteobacteria → Proteobacteria → Bacteria

Sequences

DNA sequence
Length: 633
ATGAAACCAGCATCCGTTATCATTATGGACGAACACCCTATTGTCAGAATGTCGATAGAAGTACTACTCGAGAAAAACAGTAATATTCAGGTAGTATTGAAAACCGACGACAGCCGTACGGCAATAGAACACCTGCGCACATACCCGGTCGATCTTGTCATCCTGGATATTGAACTACCTGGTTCGGATGGATTTACATTACTCAAGAGAATAAAGTCTCTGCAGGAGAAAACTCGGGTGCTGTTTCTCTCTTCTAAATCGGAGTCTTTTTATGCCGGGCGTGCTATCCGGGCCGGTGCAAATGGTTTTGTCAGTAAACGAAAGGATCTCAATGATATCTACAATGCAGTAAAAATGATTTTATCGGGATATTCTTTTTTCCCGTCGGATACCCTTAATTTCATTAACAATATAAACGCACAAAAAGGTGTGCTGAATGACATGCCGCTCTCTAACCGCGAGGTTACGGTTTTGCGTTATCTGGCAAACGGTCTGTCCAATAAGGAAATTGCTGAACAGTTGTTACTCAGCAATAAAACGATTAGCGCTCACAAGGCGAATATCTACTCCAAGCTCGGGTTGCACACCATCGTTGAGCTGATCGATTATGCAAAAATGCATGAGTTAATGTAA
PROTEIN sequence
Length: 211
MKPASVIIMDEHPIVRMSIEVLLEKNSNIQVVLKTDDSRTAIEHLRTYPVDLVILDIELPGSDGFTLLKRIKSLQEKTRVLFLSSKSESFYAGRAIRAGANGFVSKRKDLNDIYNAVKMILSGYSFFPSDTLNFINNINAQKGVLNDMPLSNREVTVLRYLANGLSNKEIAEQLLLSNKTISAHKANIYSKLGLHTIVELIDYAKMHELM*