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NECEvent2014_6_5_scaffold_643

Alias: 176_005_scaffold_643

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Displaying 15 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_643_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22..1821)
DNA (1800bp) protein (600aa)
Elongation factor 4 {ECO:0000256|HAMAP-Rule:MF_00071}; Short=EF-4 {ECO:0000256|HAMAP-Rule:MF_00071};; EC=3.6.5.n1 {ECO:0000256|HAMAP-Rule:MF_00071};; Ribosomal back-translocase LepA {ECO:0000256|HAMAP
GTP-binding protein LepA
NECEvent2014_6_5_scaffold_643_2
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

1836..1988
DNA (153bp) protein (51aa)
Uncharacterized protein {ECO:0000313|EMBL:EJK90073.1}; TaxID=1162296 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pne
hypothetical protein
NECEvent2014_6_5_scaffold_643_3
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2007..2486)
DNA (480bp) protein (160aa)
SoxR reducing system protein RseC
Sigma-E factor regulatory protein RseC {ECO:0000313|EMBL:ESB03448.1}; TaxID=1269006 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source=
NECEvent2014_6_5_scaffold_643_4
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2483..3439)
DNA (957bp) protein (319aa)
rseB; anti-sigma E factor
Sigma-E factor regulatory protein rseB {ECO:0000313|EMBL:AHM83788.1}; TaxID=1420012 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source=
NECEvent2014_6_5_scaffold_643_5
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(3439..4089)
DNA (651bp) protein (217aa)
anti-RNA polymerase sigma factor SigE
Anti-sigma-E factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Regulator of SigE {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E anti-sigma factor RseA {ECO:0000256|PIRNR:PIRNR016938}; Sigma-E factor negative reg
NECEvent2014_6_5_scaffold_643_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(4122..4697)
DNA (576bp) protein (192aa)
RNA polymerase sigma factor RpoE
RNA polymerase sigma factor RpoE {ECO:0000313|EMBL:CDL57609.1}; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Esch
NECEvent2014_6_5_scaffold_643_7
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5118..6737
DNA (1620bp) protein (540aa)
L-aspartate oxidase (EC:1.4.3.16)
L-aspartate oxidase {ECO:0000256|RuleBase:RU362049}; EC=1.4.3.16 {ECO:0000256|RuleBase:RU362049};; TaxID=1420012 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacter
NECEvent2014_6_5_scaffold_643_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6722..7459)
DNA (738bp) protein (246aa)
tRNA1(Val) (adenine(37)-N6)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016413}; EC=2.1.1.223 {ECO:0000256|HAMAP-Rule:MF_01872, ECO:0000256|SAAS:SAAS00016405};; tRNA m6A
hypothetical protein
NECEvent2014_6_5_scaffold_643_9
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7591..8922
DNA (1332bp) protein (444aa)
ATP-dependent RNA helicase SrmB {ECO:0000256|HAMAP-Rule:MF_00967}; EC=3.6.4.13 {ECO:0000256|HAMAP-Rule:MF_00967};; TaxID=1328324 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacterial
ATP-dependent RNA helicase SrmB
NECEvent2014_6_5_scaffold_643_10
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8968..9351)
DNA (384bp) protein (128aa)
grcA; autonomous glycyl radical cofactor GrcA
Autonomous glycyl radical cofactor {ECO:0000256|HAMAP-Rule:MF_00806, ECO:0000256|SAAS:SAAS00028662}; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobact
NECEvent2014_6_5_scaffold_643_11
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9664..10353
DNA (690bp) protein (230aa)
uracil-DNA glycosylase (EC:3.2.2.-)
Uracil-DNA glycosylase {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBase:RU003780}; Short=UDG {ECO:0000256|HAMAP-Rule:MF_00148};; EC=3.2.2.27 {ECO:0000256|HAMAP-Rule:MF_00148, ECO:0000256|RuleBas
NECEvent2014_6_5_scaffold_643_12
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10412..11497)
DNA (1086bp) protein (362aa)
yfiF; putative methyltransferase
Methyltransferase {ECO:0000313|EMBL:AKH00216.1}; Putative methyltransferase {ECO:0000313|EMBL:CED77246.1}; TaxID=573 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enteroba
NECEvent2014_6_5_scaffold_643_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

11701..12126
DNA (426bp) protein (142aa)
Thioredoxin 2 {ECO:0000313|EMBL:CDL57618.1}; EC=1.8.1.8 {ECO:0000313|EMBL:CDL57618.1};; TaxID=1432560 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Esc
thioredoxin 2
NECEvent2014_6_5_scaffold_643_14
Enterococcus gallinarum, Enterococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

12196..12894
DNA (699bp) protein (233aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ERE62865.1}; TaxID=1357296 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Enterococcaceae; Enterococcus.;" source="Enterococcus gallinarum EGD-AAK12
NECEvent2014_6_5_scaffold_643_15
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12929..15580
DNA (2652bp) protein (884aa)
CoA binding domain protein {ECO:0000313|EMBL:ESB03461.1}; TaxID=1269006 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella
protein acetyltransferase
Displaying 15 items

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