ggKbase home page

NECEvent2014_6_5_scaffold_51

Alias: 176_005_scaffold_51

Search features with annotation key words

Displaying items 1-30 of 67 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_51_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(279..1133)
DNA (855bp) protein (285aa)
Tagatose 1,6-bisphosphate aldolase {ECO:0000313|EMBL:KJZ87150.1}; EC=4.1.2.40 {ECO:0000313|EMBL:KJZ87150.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
gatY; D-tagatose-1,6-bisphosphate aldolase subunit GatY (EC:4.1.2.40)
NECEvent2014_6_5_scaffold_51_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1178..1696)
DNA (519bp) protein (173aa)
Galactose-6-phosphate isomerase, LacB subunit {ECO:0000313|EMBL:KJZ87228.1}; EC=5.3.1.26 {ECO:0000313|EMBL:KJZ87228.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
lacB; galactose-6-phosphate isomerase subunit LacB (EC:5.3.1.26)
NECEvent2014_6_5_scaffold_51_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1718..2143)
DNA (426bp) protein (142aa)
Ribose-5-phosphate isomerase B {ECO:0000313|EMBL:EEP55490.1}; EC=5.3.1.6 {ECO:0000313|EMBL:EEP55490.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostrid
lacA2; galactose-6-phosphate isomerase subunit LacA (EC:5.3.1.26)
NECEvent2014_6_5_scaffold_51_4
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2170..3579)
DNA (1410bp) protein (470aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ97333.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
PTS system galactitol/fructose specific transporter subunit IIC
NECEvent2014_6_5_scaffold_51_5
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3600..3905)
DNA (306bp) protein (102aa)
Phosphoglucosamine mutase {ECO:0000313|EMBL:KJZ97386.1}; EC=5.4.2.10 {ECO:0000313|EMBL:KJZ97386.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
PTS system galactitol/fructose specific transporter subunit IIB
NECEvent2014_6_5_scaffold_51_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3945..4412)
DNA (468bp) protein (156aa)
Pts system enzyme iibc component {ECO:0000313|EMBL:EEP55294.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 s
PTS system galactitol/fructose specific transporter subunit IIBC
NECEvent2014_6_5_scaffold_51_7
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4544..5302)
DNA (759bp) protein (253aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ94264.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
lacR; lactose phosphotransferase system repressor
NECEvent2014_6_5_scaffold_51_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5436..5555)
DNA (120bp) protein (40aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP55211.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
NECEvent2014_6_5_scaffold_51_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5924..7750)
DNA (1827bp) protein (609aa)
Glutamine--fructose-6-phosphate aminotransferase [isomerizing] {ECO:0000256|HAMAP-Rule:MF_00164, ECO:0000256|SAAS:SAAS00039584}; EC=2.6.1.16 {ECO:0000256|HAMAP-Rule:MF_00164};; D-fructose-6-phosphate
glmS; glutamine-fructose-6-phosphate transaminase (isomerizing) (EC:2.6.1.16)
NECEvent2014_6_5_scaffold_51_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8472..9545)
DNA (1074bp) protein (358aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91663.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
S-layer protein
NECEvent2014_6_5_scaffold_51_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9634..10935)
DNA (1302bp) protein (434aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP55083.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_6_5_scaffold_51_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11070..14273)
DNA (3204bp) protein (1068aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30552.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative multidrug efflux pump, membrane protein
NECEvent2014_6_5_scaffold_51_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14278..15528)
DNA (1251bp) protein (417aa)
Uncharacterized protein {ECO:0000313|EMBL:ETI91666.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
RND family efflux transporter MFP subunit
NECEvent2014_6_5_scaffold_51_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15852..16337
DNA (486bp) protein (162aa)
Transcriptional regulator, MarR family {ECO:0000313|EMBL:KJZ87237.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBU
MarR-family transcriptional regulator
NECEvent2014_6_5_scaffold_51_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16396..17193)
DNA (798bp) protein (266aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30549.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
endonuclease/exonuclease/phosphatase family protein
NECEvent2014_6_5_scaffold_51_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17199..18854)
DNA (1656bp) protein (552aa)
pts system, iibc component (EC:2.7.1.69)
ATPase component of general energizing module of ECF transporter {ECO:0000313|EMBL:KJZ97379.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" s
NECEvent2014_6_5_scaffold_51_17
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18981..20654)
DNA (1674bp) protein (558aa)
Alpha-amylase {ECO:0000256|RuleBase:RU361134}; EC=3.2.1.1 {ECO:0000256|RuleBase:RU361134};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sourc
glycosyl hydrolase family protein
NECEvent2014_6_5_scaffold_51_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20920..21921)
DNA (1002bp) protein (334aa)
Maltose operon transcriptional repressor MalR, LacI family {ECO:0000313|EMBL:KJZ87202.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source=
alanine racemase
NECEvent2014_6_5_scaffold_51_19
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22170..23762)
DNA (1593bp) protein (531aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:
malQ1; 4-alpha-glucanotransferase MalQ (EC:2.4.1.25)
NECEvent2014_6_5_scaffold_51_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23921..24823)
DNA (903bp) protein (301aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30544.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_6_5_scaffold_51_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24823..25689)
DNA (867bp) protein (289aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ30543.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
binding-protein-dependent transport system inner membrane protein
NECEvent2014_6_5_scaffold_51_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25785..27122)
DNA (1338bp) protein (446aa)
Maltose-binding protein {ECO:0000313|EMBL:ETI91675.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
extracellular solute-binding protein
NECEvent2014_6_5_scaffold_51_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27430..27690)
DNA (261bp) protein (87aa)
GIY-YIG domain protein {ECO:0000313|EMBL:KJZ87212.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative endonuclease containing a URI domain
NECEvent2014_6_5_scaffold_51_24
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27902..29563)
DNA (1662bp) protein (554aa)
Ketol-acid reductoisomerase {ECO:0000313|EMBL:KJZ97376.1}; EC=1.1.1.86 {ECO:0000313|EMBL:KJZ97376.1};; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridi
ilvB1; acetolactate synthase large subunit (EC:2.2.1.6)
NECEvent2014_6_5_scaffold_51_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29731..31389)
DNA (1659bp) protein (553aa)
Dihydroxy-acid dehydratase {ECO:0000256|HAMAP-Rule:MF_00012}; Short=DAD {ECO:0000256|HAMAP-Rule:MF_00012};; EC=4.2.1.9 {ECO:0000256|HAMAP-Rule:MF_00012};; TaxID=1523154 species="Bacteria; Firmicutes;
ilvD; dihydroxy-acid dehydratase (EC:4.2.1.9)
NECEvent2014_6_5_scaffold_51_26
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31396..32493)
DNA (1098bp) protein (366aa)
3-isopropylmalate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445}; EC=1.1.1.85 {ECO:0000256|HAMAP-Rule:MF_01033, ECO:0000256|RuleBase:RU004445};; 3-IPM-DH {ECO:0000256|H
leuB; 3-isopropylmalate dehydrogenase (EC:1.1.1.85)
NECEvent2014_6_5_scaffold_51_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32670..33155)
DNA (486bp) protein (162aa)
3-isopropylmalate dehydratase small subunit {ECO:0000256|HAMAP-Rule:MF_01032}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01032};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01032}; Isopropylmalate is
leuD; 3-isopropylmalate dehydratase small subunit LeuD (EC:4.2.1.33)
NECEvent2014_6_5_scaffold_51_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33169..34428)
DNA (1260bp) protein (420aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01027}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01027};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01027}; Isopropylmalate is
leuC2; 3-isopropylmalate dehydratase large subunit LeuC (EC:4.2.1.33)
NECEvent2014_6_5_scaffold_51_29
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34443..36038)
DNA (1596bp) protein (532aa)
(R)-citramalate synthase {ECO:0000313|EMBL:KJZ87143.1}; EC=2.3.1.182 {ECO:0000313|EMBL:KJZ87143.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
AIPM/hcit synthase family transferase (EC:2.3.3.-)
NECEvent2014_6_5_scaffold_51_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36151..36657)
DNA (507bp) protein (169aa)
ilvH; acetolactate synthase small subunit (EC:2.2.1.6)
Acetolactate synthase, small subunit {ECO:0000313|EMBL:ENZ30534.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
Displaying items 1-30 of 67 in total

View Taxonomy