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NECEvent2014_6_5_scaffold_120

Alias: 176_005_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 47 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_120_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(159..1913)
DNA (1755bp) protein (585aa)
xenobiotic-transporting ATPase (EC:3.6.3.44)
Lipid A export ATP-binding/permease protein MsbA {ECO:0000313|EMBL:KJZ86065.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
NECEvent2014_6_5_scaffold_120_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2194..3342)
DNA (1149bp) protein (383aa)
Cyclically-permuted mutarotase {ECO:0000313|EMBL:ENZ35562.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.
lipoprotein
NECEvent2014_6_5_scaffold_120_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3460..4401)
DNA (942bp) protein (314aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.2)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35561.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_120_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4405..5103)
DNA (699bp) protein (233aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=997
N-acylglucosamine-6-phosphate 2-epimerase (EC:5.1.3.9)
NECEvent2014_6_5_scaffold_120_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5223..6176)
DNA (954bp) protein (318aa)
deacetylase (EC:3.1.1.41)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35559.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_120_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6178..7143)
DNA (966bp) protein (322aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35558.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
Acetyl xylan esterase
NECEvent2014_6_5_scaffold_120_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7155..8774)
DNA (1620bp) protein (540aa)
Pyridine nucleotide-disulphide oxidoreductase {ECO:0000313|EMBL:EEP52636.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium b
pyridine nucleotide-disulfide oxidoreductase
NECEvent2014_6_5_scaffold_120_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8764..9693)
DNA (930bp) protein (310aa)
N-acetylneuraminate lyase {ECO:0000313|EMBL:ENZ35556.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dihydrodipicolinate synthase/N-acetylneuraminate lyase
NECEvent2014_6_5_scaffold_120_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9686..10726)
DNA (1041bp) protein (347aa)
Oligopeptide transport ATP-binding protein OppF {ECO:0000313|EMBL:KJZ86073.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
oligopeptide/dipeptide ABC transporter ATP-binding protein
NECEvent2014_6_5_scaffold_120_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10713..11723)
DNA (1011bp) protein (337aa)
Oligopeptide transport ATP-binding protein OppD {ECO:0000313|EMBL:KJZ86075.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridiu
oligopeptide/dipeptide ABC transporter ATP-binding protein
NECEvent2014_6_5_scaffold_120_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11735..12664)
DNA (930bp) protein (310aa)
Peptide/nickel ABC transporter permease {ECO:0000313|EMBL:ENZ35553.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyric
dipeptide/oligopeptide/nickel ABC transporter permease
NECEvent2014_6_5_scaffold_120_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12676..13635)
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ35552.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dipeptide/oligopeptide/nickel ABC transporter permease
NECEvent2014_6_5_scaffold_120_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13710..15350)
DNA (1641bp) protein (547aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
extracellular solute-binding protein, family 5
NECEvent2014_6_5_scaffold_120_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15868..16704)
DNA (837bp) protein (279aa)
Sialic acid utilization regulator, RpiR family {ECO:0000313|EMBL:KJZ86033.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
RpiR family transcriptional regulator
NECEvent2014_6_5_scaffold_120_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17009..17842)
DNA (834bp) protein (278aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86079.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
prephenate dehydrogenase
NECEvent2014_6_5_scaffold_120_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17924..18937)
DNA (1014bp) protein (338aa)
2-keto-3-deoxy-D-arabino-heptulosonate-7-phosphate synthase I beta {ECO:0000313|EMBL:KJZ86069.1}; EC=2.5.1.54 {ECO:0000313|EMBL:KJZ86069.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; C
3-deoxy-7-phosphoheptulonate synthase
NECEvent2014_6_5_scaffold_120_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19128..19892)
DNA (765bp) protein (255aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214, ECO:0000256|SAAS:SAAS00219718}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214,
aroD; 3-dehydroquinate dehydratase AroD (EC:4.2.1.10)
NECEvent2014_6_5_scaffold_120_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20013..21032)
DNA (1020bp) protein (340aa)
TRAP-type transport system, periplasmic component, predicted N-acetylneuraminate-binding protein {ECO:0000313|EMBL:KJZ86068.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales;
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
NECEvent2014_6_5_scaffold_120_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21043..22338)
DNA (1296bp) protein (432aa)
TRAP-type C4-dicarboxylate transport system, large permease component {ECO:0000313|EMBL:KJZ86057.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium
TRAP transporter, DctM subunit
NECEvent2014_6_5_scaffold_120_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22361..22822)
DNA (462bp) protein (154aa)
C4-dicarboxylate ABC transporter substrate-binding protein {ECO:0000313|EMBL:KHD16366.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Cl
TRAP-type C4-dicarboxylate transport system, small permease component
NECEvent2014_6_5_scaffold_120_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23027..23899)
DNA (873bp) protein (291aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|SAAS:SAAS00228653}; EC=1.1.1.25 {ECO:0000256|SAAS:SAAS00216361};; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Cl
hypothetical protein
NECEvent2014_6_5_scaffold_120_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24095..25303)
DNA (1209bp) protein (403aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
inner membrane transport protein YdiN
NECEvent2014_6_5_scaffold_120_23
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25605..26639
DNA (1035bp) protein (345aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86001.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative transcription regulator, AraC family
NECEvent2014_6_5_scaffold_120_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26742..28745)
DNA (2004bp) protein (668aa)
NADH oxidase (EC:1.-.-.-)
NADH oxidase {ECO:0000313|EMBL:ETI88229.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NECEvent2014_6_5_scaffold_120_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28996..29883
DNA (888bp) protein (296aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86002.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
yybE1; HTH-type transcriptional regulator YybE
NECEvent2014_6_5_scaffold_120_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30024..30539)
DNA (516bp) protein (172aa)
Shikimate kinase {ECO:0000256|HAMAP-Rule:MF_00109}; Short=SK {ECO:0000256|HAMAP-Rule:MF_00109};; EC=2.7.1.71 {ECO:0000256|HAMAP-Rule:MF_00109};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia
aroK; shikimate kinase AroK (EC:2.7.1.71)
NECEvent2014_6_5_scaffold_120_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30616..31428)
DNA (813bp) protein (271aa)
Shikimate dehydrogenase (NADP(+)) {ECO:0000256|HAMAP-Rule:MF_00222, ECO:0000256|SAAS:SAAS00228653}; Short=SDH {ECO:0000256|HAMAP-Rule:MF_00222};; EC=1.1.1.25 {ECO:0000256|HAMAP-Rule:MF_00222};; TaxID=
aroE1; shikimate dehydrogenase AroE (EC:1.1.1.25)
NECEvent2014_6_5_scaffold_120_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31506..32660)
DNA (1155bp) protein (385aa)
pheA: P-protein (EC:5.4.99.5 4.2.1.51)
Chorismate mutase {ECO:0000313|EMBL:ENZ35536.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_120_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32694..33767)
DNA (1074bp) protein (358aa)
Chorismate synthase {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU000605}; Short=CS {ECO:0000256|HAMAP-Rule:MF_00300};; EC=4.2.3.5 {ECO:0000256|HAMAP-Rule:MF_00300, ECO:0000256|RuleBase:RU0
aroC; chorismate synthase AroC (EC:4.2.3.5)
NECEvent2014_6_5_scaffold_120_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33745..35052)
DNA (1308bp) protein (436aa)
3-phosphoshikimate 1-carboxyvinyltransferase {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531}; EC=2.5.1.19 {ECO:0000256|HAMAP-Rule:MF_00210, ECO:0000256|RuleBase:RU000531};; 5-enolpyru
aroA; 3-phosphoshikimate 1-carboxyvinyltransferase AroA (EC:2.5.1.19)
Displaying items 1-30 of 47 in total

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