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NECEvent2014_6_5_scaffold_200

Alias: 176_005_scaffold_200

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_200_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

475..1392
DNA (918bp) protein (306aa)
4-hydroxy-tetrahydrodipicolinate synthase {ECO:0000256|HAMAP-Rule:MF_00418}; Short=HTPA synthase {ECO:0000256|HAMAP-Rule:MF_00418};; EC=4.3.3.7 {ECO:0000256|HAMAP-Rule:MF_00418};; TaxID=1523156 specie
dapA2; 4-hydroxy-tetrahydrodipicolinate synthase DapA (EC:4.3.3.7)
NECEvent2014_6_5_scaffold_200_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1404..2162
DNA (759bp) protein (253aa)
4-hydroxy-tetrahydrodipicolinate reductase {ECO:0000256|HAMAP-Rule:MF_00102, ECO:0000256|SAAS:SAAS00018068}; Short=HTPA reductase {ECO:0000256|HAMAP-Rule:MF_00102};; EC=1.17.1.8 {ECO:0000256|HAMAP-Rul
dapB; 4-hydroxy-tetrahydrodipicolinate reductase DapB
NECEvent2014_6_5_scaffold_200_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2283..3044)
DNA (762bp) protein (254aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ36151.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter-like protein
NECEvent2014_6_5_scaffold_200_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3095..4066)
DNA (972bp) protein (324aa)
Oligopeptide transport system permease protein OppB {ECO:0000313|EMBL:KJZ88057.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
oligopeptide/dipeptide ABC transporter ATPase
NECEvent2014_6_5_scaffold_200_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4088..5620)
DNA (1533bp) protein (511aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ36149.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
peptide ABC transporter periplasmic protein
NECEvent2014_6_5_scaffold_200_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5626..6456)
DNA (831bp) protein (277aa)
Dipeptide transport system permease protein DppC {ECO:0000313|EMBL:KJZ88069.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridi
binding-protein-dependent transport system inner membrane protein
NECEvent2014_6_5_scaffold_200_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6458..7318)
DNA (861bp) protein (287aa)
Inner membrane ABC transporter permease protein YddR {ECO:0000313|EMBL:EEP53541.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
binding-protein-dependent transport system inner membrane protein
NECEvent2014_6_5_scaffold_200_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7640..8599)
DNA (960bp) protein (320aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ36146.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
succinylglutamate desuccinylase/aspartoacylase
NECEvent2014_6_5_scaffold_200_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8905..10182)
DNA (1278bp) protein (426aa)
rpfG2; cyclic di-GMP phosphodiesterase response regulator RpfG (EC:3.1.4.52)
Uncharacterized protein {ECO:0000313|EMBL:ENZ36145.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
NECEvent2014_6_5_scaffold_200_10
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10360..12015)
DNA (1656bp) protein (552aa)
Oligopeptide ABC transporter, periplasmic oligopeptide-binding protein OppA {ECO:0000313|EMBL:KJZ88052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
oppA; oligopeptide-binding protein OppA
NECEvent2014_6_5_scaffold_200_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12133..13116)
DNA (984bp) protein (328aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ88059.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
appF4; oligopeptide transport ATP-binding protein AppF
NECEvent2014_6_5_scaffold_200_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13116..14123)
DNA (1008bp) protein (336aa)
Oligopeptide/dipeptide ABC transporter, ATP-binding protein domain {ECO:0000313|EMBL:ENZ36142.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
oligopeptide transport ATP-binding protein OppD
NECEvent2014_6_5_scaffold_200_13
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14136..15080)
DNA (945bp) protein (315aa)
Oligopeptide transport system permease protein OppC {ECO:0000313|EMBL:KJZ88067.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostr
oligopeptide transport system permease OppC
NECEvent2014_6_5_scaffold_200_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15093..16019)
DNA (927bp) protein (309aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ36140.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
oligopeptide transport system permease OppB
NECEvent2014_6_5_scaffold_200_15
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16553..17695)
DNA (1143bp) protein (381aa)
N-acetyl-L,L-diaminopimelate aminotransferase {ECO:0000313|EMBL:KJZ89556.1}; EC=2.6.1.- {ECO:0000313|EMBL:KJZ89556.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostrid
yugH1; putative aminotransferase YugH (EC:2.6.1.-)
NECEvent2014_6_5_scaffold_200_16
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17975..18685
DNA (711bp) protein (237aa)
2,3,4,5-tetrahydropyridine-2,6-dicarboxylate N-acetyltransferase {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00023633}; EC=2.3.1.89 {ECO:0000256|HAMAP-Rule:MF_01691, ECO:0000256|SAAS:SAAS00
tetrahydrodipicolinate succinyltransferase domain-containing protein
NECEvent2014_6_5_scaffold_200_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18806..21781)
DNA (2976bp) protein (992aa)
Pullulanase, type I {ECO:0000313|EMBL:ETI90024.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
amyX; alpha-dextran endo-1,6-alpha-glucosidase
NECEvent2014_6_5_scaffold_200_18
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22083..22745)
DNA (663bp) protein (221aa)
Surface antigen {ECO:0000313|EMBL:KJZ97176.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
single-strand binding protein/primosomal replication protein
NECEvent2014_6_5_scaffold_200_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22851..23615)
DNA (765bp) protein (255aa)
Polysaccharide deacetylase family sporulation protein PdaB {ECO:0000313|EMBL:ENZ36135.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
polysaccharide deacetylase
NECEvent2014_6_5_scaffold_200_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23738..24262
DNA (525bp) protein (175aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ85213.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_200_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24317..25258)
DNA (942bp) protein (314aa)
Surface antigen {ECO:0000313|EMBL:KJZ85201.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
YVTN beta-propeller repeat-containing protein
NECEvent2014_6_5_scaffold_200_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25505..25753
DNA (249bp) protein (83aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ85215.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_200_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25813..27768)
DNA (1956bp) protein (652aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ36131.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
HIRAN domain protein
NECEvent2014_6_5_scaffold_200_24
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27819..29126)
DNA (1308bp) protein (436aa)
Dihydrofolate synthase/Folylpolyglutamate synthase {ECO:0000313|EMBL:KJZ92093.1}; EC=6.3.2.12 {ECO:0000313|EMBL:KJZ92093.1};; EC=6.3.2.17 {ECO:0000313|EMBL:KJZ92093.1};; TaxID=1523155 species="Bacteri
folC; folylpolyglutamate synthase FolC (EC:6.3.2.17)
NECEvent2014_6_5_scaffold_200_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29441..30301)
DNA (861bp) protein (287aa)
Integral membrane protein TerC {ECO:0000313|EMBL:EEP53670.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str
alx2; inner membrane protein Alx
NECEvent2014_6_5_scaffold_200_26
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


comp(30443..33085)
DNA (2643bp) protein (881aa)
Valine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00026840}; EC=6.1.1.9 {ECO:0000256|HAMAP-Rule:MF_02004, ECO:0000256|SAAS:SAAS00105779};; Valyl-tRNA synthetase {ECO:0000256|H
valS; valyl-tRNA synthetase
NECEvent2014_6_5_scaffold_200_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33673..33960
DNA (288bp) protein (96aa)
YlxP-like protein {ECO:0000313|EMBL:KJZ85214.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_200_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33994..34866)
DNA (873bp) protein (291aa)
Muramoyltetrapeptide carboxypeptidase {ECO:0000313|EMBL:KJZ85206.1}; EC=3.4.17.13 {ECO:0000313|EMBL:KJZ85206.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae
LD-carboxypeptidase family protein
NECEvent2014_6_5_scaffold_200_29
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34924..36495)
DNA (1572bp) protein (524aa)
Acetate CoA-transferase YdiF {ECO:0000256|PIRNR:PIRNR000858}; EC=2.8.3.8 {ECO:0000256|PIRNR:PIRNR000858};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clost
ydiF3; acetate CoA-transferase YdiF (EC:2.8.3.8)
NECEvent2014_6_5_scaffold_200_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(36712..37338)
DNA (627bp) protein (209aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ85208.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L-ribulose-5-phosphate 4-epimerase
Displaying items 1-30 of 32 in total

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