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NECEvent2014_6_5_scaffold_247

Alias: 176_005_scaffold_247

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Displaying 29 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_247_1
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..488
DNA (486bp) protein (162aa)
Putative uncharacterized protein {ECO:0000313|EMBL:EHN14346.1}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA
hypothetical protein
NECEvent2014_6_5_scaffold_247_2
Clostridium sporogenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

830..1111
DNA (282bp) protein (94aa)
pyrR; pyrimidine operon regulatory protein/uracil phosphoribosyltransferase (EC:2.4.2.9)
Bifunctional protein PyrR {ECO:0000256|HAMAP-Rule:MF_01219}; TaxID=1075091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sporogenes PA 36
NECEvent2014_6_5_scaffold_247_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1192..2730
DNA (1539bp) protein (513aa)
gpmI; 2,3-bisphosphoglycerate-independent phosphoglycerate mutase GpmI (EC:5.4.2.1)
2,3-bisphosphoglycerate-independent phosphoglycerate mutase {ECO:0000256|HAMAP-Rule:MF_01038}; Short=BPG-independent PGAM {ECO:0000256|HAMAP-Rule:MF_01038};; Short=Phosphoglyceromutase {ECO:0000256|HA
NECEvent2014_6_5_scaffold_247_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2856..3458
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ87526.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
NECEvent2014_6_5_scaffold_247_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3517..4026)
DNA (510bp) protein (170aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ31034.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative cell wall binding protein
NECEvent2014_6_5_scaffold_247_6
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4251..5543
DNA (1293bp) protein (431aa)
Enolase {ECO:0000256|HAMAP-Rule:MF_00318}; EC=4.2.1.11 {ECO:0000256|HAMAP-Rule:MF_00318};; 2-phospho-D-glycerate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00318}; 2-phosphoglycerate dehydratase {ECO:0000
eno; enolase Eno (EC:4.2.1.11)
NECEvent2014_6_5_scaffold_247_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5923..6276
DNA (354bp) protein (118aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ87525.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
aminopeptidase
NECEvent2014_6_5_scaffold_247_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6477..6710
DNA (234bp) protein (78aa)
Preprotein translocase subunit SecG {ECO:0000313|EMBL:KJZ87523.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN12
secG; preprotein translocase, SecG subunit SecG
NECEvent2014_6_5_scaffold_247_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7031..9055
DNA (2025bp) protein (675aa)
Putative K(+)-stimulated pyrophosphate-energized sodium pump {ECO:0000256|HAMAP-Rule:MF_01129}; EC=3.6.1.1 {ECO:0000256|HAMAP-Rule:MF_01129};; Membrane-bound sodium-translocating pyrophosphatase {ECO:
hppA; membrane-bound proton-translocating pyrophosphatase (EC:3.6.1.1)
NECEvent2014_6_5_scaffold_247_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9591..10880
DNA (1290bp) protein (430aa)
O-acetylhomoserine/O-acetylserine sulfhydrylase (EC:2.5.1.47)
O-acetylhomoserine aminocarboxypropyltransferase/cysteine synthase {ECO:0000313|EMBL:ENZ31029.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;"
NECEvent2014_6_5_scaffold_247_11
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11192..13441
DNA (2250bp) protein (750aa)
Ribonuclease R {ECO:0000256|HAMAP-Rule:MF_01895}; Short=RNase R {ECO:0000256|HAMAP-Rule:MF_01895};; EC=3.1.13.1 {ECO:0000256|HAMAP-Rule:MF_01895};; TaxID=1523155 species="Bacteria; Firmicutes; Clostri
rnr; ribonuclease R (EC:3.1.13.1)
NECEvent2014_6_5_scaffold_247_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13625..14095
DNA (471bp) protein (157aa)
SsrA-binding protein {ECO:0000256|HAMAP-Rule:MF_00023, ECO:0000256|SAAS:SAAS00023472}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clo
smpB; SsrA-binding protein SmpB
NECEvent2014_6_5_scaffold_247_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14438..15478
DNA (1041bp) protein (347aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clos
metN; methionine import ATP-binding protein MetN (EC:3.6.3.-)
NECEvent2014_6_5_scaffold_247_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15478..16116
DNA (639bp) protein (213aa)
D-methionine transport system permease protein MetI {ECO:0000313|EMBL:EEP55663.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
metI; D-methionine transport system permease protein MetI
NECEvent2014_6_5_scaffold_247_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16304..17137
DNA (834bp) protein (278aa)
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
YaeC family lipoprotein
NECEvent2014_6_5_scaffold_247_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17345..18310
DNA (966bp) protein (322aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP55121.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_6_5_scaffold_247_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18350..19312
DNA (963bp) protein (321aa)
Uncharacterized protein {ECO:0000313|EMBL:EEP55199.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
hypothetical protein
NECEvent2014_6_5_scaffold_247_18
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19403..19576
DNA (174bp) protein (58aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ31021.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
NECEvent2014_6_5_scaffold_247_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19827..21134
DNA (1308bp) protein (436aa)
Xre family DNA-binding domain and TPR-repeat-containing protein {ECO:0000313|EMBL:KJZ87471.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" so
putative transcriptional regulator
NECEvent2014_6_5_scaffold_247_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21151..22413
DNA (1263bp) protein (421aa)
TPR protein {ECO:0000313|EMBL:EEP55435.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
TPR repeat-containing protein
NECEvent2014_6_5_scaffold_247_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22480..23991)
DNA (1512bp) protein (504aa)
Band 7 protein:Flotillin {ECO:0000313|EMBL:KJZ87530.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
flotillin
NECEvent2014_6_5_scaffold_247_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24306..26921
DNA (2616bp) protein (872aa)
Chaperone protein ClpB {ECO:0000256|RuleBase:RU362034}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
clpB2; chaperone protein ClpB
NECEvent2014_6_5_scaffold_247_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27123..28118
DNA (996bp) protein (332aa)
dhaK; dihydroxyacetone kinase subunit DhaK (EC:2.7.1.-)
Dihydroxyacetone kinase, DhaK subunit {ECO:0000313|EMBL:ENZ31016.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum
NECEvent2014_6_5_scaffold_247_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28156..28782
DNA (627bp) protein (209aa)
Dihydroxyacetone kinase, L subunit {ECO:0000313|EMBL:EEP55505.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEP55505.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clos
putative kinase (EC:2.7.-.-)
NECEvent2014_6_5_scaffold_247_25
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28803..29192
DNA (390bp) protein (130aa)
Phosphoenolpyruvate-dihydroxyacetone phosphotransferase {ECO:0000313|EMBL:KJZ83310.1}; EC=2.7.1.121 {ECO:0000313|EMBL:KJZ83310.1};; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridial
PTS system mannnose-specific transporter subunit IIA
NECEvent2014_6_5_scaffold_247_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29520..31259
DNA (1740bp) protein (580aa)
Potassium-transporting ATPase A chain {ECO:0000256|HAMAP-Rule:MF_00275}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00275};; ATP phosphohydrolase [potassium-transporting] A chain {ECO:0000256|HAMAP-Rule:M
kdpA; potassium-transporting ATPase subunit A (EC:3.6.3.12)
NECEvent2014_6_5_scaffold_247_27
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31276..33342
DNA (2067bp) protein (689aa)
Potassium-transporting ATPase B chain {ECO:0000256|HAMAP-Rule:MF_00285}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00285};; ATP phosphohydrolase [potassium-transporting] B chain {ECO:0000256|HAMAP-Rule:M
kdpB; potassium-transporting ATPase subunit B (EC:3.6.3.12)
NECEvent2014_6_5_scaffold_247_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33360..33965
DNA (606bp) protein (202aa)
Potassium-transporting ATPase C chain {ECO:0000256|HAMAP-Rule:MF_00276}; EC=3.6.3.12 {ECO:0000256|HAMAP-Rule:MF_00276};; ATP phosphohydrolase [potassium-transporting] C chain {ECO:0000256|HAMAP-Rule:M
kdpC; potassium-transporting ATPase subunit C (EC:3.6.3.12)
NECEvent2014_6_5_scaffold_247_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33987..34862
DNA (876bp) protein (292aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ86730.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
Displaying 29 items

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