ggKbase home page

NECEvent2014_6_5_scaffold_491

Alias: 176_005_scaffold_491

Search features with annotation key words

Displaying 20 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
NECEvent2014_6_5_scaffold_491_1
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

507..1484
DNA (978bp) protein (326aa)
PTS system, mannose-specific IIB component/PTS system, mannose-specific IIA component {ECO:0000313|EMBL:KJZ84034.1}; EC=2.7.1.69 {ECO:0000313|EMBL:KJZ84034.1};; TaxID=1523154 species="Bacteria; Firmic
PTS system sorbose subfamily transporter subunit IIB
NECEvent2014_6_5_scaffold_491_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1518..2324
DNA (807bp) protein (269aa)
Uncharacterized protein {ECO:0000313|EMBL:ENZ32274.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
PTS system sorbose-specific transporter subunit IIC
NECEvent2014_6_5_scaffold_491_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2343..3254
DNA (912bp) protein (304aa)
PTS system, mannose/fructose/sorbose family, IID component {ECO:0000313|EMBL:ENZ32273.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
PTS system mannose/fructose/sorbose family transporter subunit IID
NECEvent2014_6_5_scaffold_491_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3459..3833
DNA (375bp) protein (125aa)
Putative regulator of the mannose operon, ManO {ECO:0000313|EMBL:KJZ84037.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium
hypothetical protein
NECEvent2014_6_5_scaffold_491_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4110..6086
DNA (1977bp) protein (659aa)
Beta-lactamase {ECO:0000313|EMBL:KJZ84017.1}; EC=3.5.2.6 {ECO:0000313|EMBL:KJZ84017.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="
beta-lactamase
NECEvent2014_6_5_scaffold_491_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6105..6884
DNA (780bp) protein (260aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ84032.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
regulatory protein VanR
NECEvent2014_6_5_scaffold_491_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6910..7968
DNA (1059bp) protein (353aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ84028.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
two-component sensor histidine kinase
NECEvent2014_6_5_scaffold_491_8
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8036..8932)
DNA (897bp) protein (299aa)
Permease of the drug/metabolite transporter (DMT) superfamily {ECO:0000313|EMBL:KJZ84052.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" sour
protein of unknown function DUF6 transmembrane
NECEvent2014_6_5_scaffold_491_9
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9076..9972
DNA (897bp) protein (299aa)
Helix-turn-helix, AraC type {ECO:0000313|EMBL:KJZ92122.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
helix-turn-helix domain-containing protein
NECEvent2014_6_5_scaffold_491_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10099..11436)
DNA (1338bp) protein (446aa)
Chemotaxis protein {ECO:0000313|EMBL:KHD14138.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
Histidine kinase, HAMP region:chemotaxis sensory transducer precursor
NECEvent2014_6_5_scaffold_491_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11685..11894
DNA (210bp) protein (70aa)
Putative ferrous iron transport protein {ECO:0000313|EMBL:KJZ84162.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IB
FeoA family protein
NECEvent2014_6_5_scaffold_491_12
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11929..12150
DNA (222bp) protein (74aa)
Ferrous iron transport protein A {ECO:0000313|EMBL:KJZ84157.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.
hypothetical protein
NECEvent2014_6_5_scaffold_491_13
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12266..14416
DNA (2151bp) protein (717aa)
Ferrous iron transport protein B {ECO:0000313|EMBL:KJZ92124.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;
ferrous iron transport protein B
NECEvent2014_6_5_scaffold_491_14
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14637..14813
DNA (177bp) protein (59aa)
Uncharacterized protein {ECO:0000313|EMBL:KJZ91759.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
hypothetical protein
NECEvent2014_6_5_scaffold_491_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15141..16058
DNA (918bp) protein (306aa)
Ribokinase {ECO:0000313|EMBL:EEP55973.1}; EC=2.7.1.15 {ECO:0000313|EMBL:EEP55973.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clos
rbsK; ribokinase
NECEvent2014_6_5_scaffold_491_16
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16075..16470
DNA (396bp) protein (132aa)
D-ribose pyranase {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00011477}; EC=5.4.99.62 {ECO:0000256|HAMAP-Rule:MF_01661, ECO:0000256|SAAS:SAAS00166232};; TaxID=632245 species="Bacteria; Firm
D-ribose pyranase
NECEvent2014_6_5_scaffold_491_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16484..17992
DNA (1509bp) protein (503aa)
Ribose import ATP-binding protein RbsA {ECO:0000256|HAMAP-Rule:MF_01716}; EC=3.6.3.17 {ECO:0000256|HAMAP-Rule:MF_01716};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostri
ABC transporter related protein
NECEvent2014_6_5_scaffold_491_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18013..18945
DNA (933bp) protein (311aa)
Ribose ABC transport system, permease protein RbsC {ECO:0000313|EMBL:KJZ84139.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostri
rbsC; ribose ABC transporter permease
NECEvent2014_6_5_scaffold_491_19
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19072..19980
DNA (909bp) protein (303aa)
D-ribose-binding protein {ECO:0000313|EMBL:EEP56543.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT
ribose ABC transporter periplasmicD-ribose-binding protein
NECEvent2014_6_5_scaffold_491_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20032..20352
DNA (321bp) protein (107aa)
Probable transaldolase {ECO:0000256|HAMAP-Rule:MF_00494}; EC=2.2.1.2 {ECO:0000256|HAMAP-Rule:MF_00494};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostri
fructose-6-phosphate aldolase, TalC/MipB family (EC:2.2.1.2)
Displaying 20 items

View Taxonomy